Sequence 1: | NP_476722.1 | Gene: | shg / 37386 | FlyBaseID: | FBgn0003391 | Length: | 1507 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_062034.2 | Gene: | Cdh22 / 29182 | RGDID: | 2321 | Length: | 813 | Species: | Rattus norvegicus |
Alignment Length: | 1211 | Identity: | 221/1211 - (18%) |
---|---|---|---|
Similarity: | 350/1211 - (28%) | Gaps: | 575/1211 - (47%) |
- Green bases have known domain annotations that are detailed below.
Fly 355 FVFNQIGNEVTISLGKTLDYEAITDYTLTMIVRN---THELGTEHQIKIQVEDVNDNIPYYTE-V 415
Fly 416 KSGTILENEPPGTPVMQVRAFDMD----GTSANNIVSFELADNREYFTIDPNTGNI-TALTTFDR 475
Fly 476 EERDFYNVKVIASDNSPSSLFDNGEPN--RGHQVFRISIGDKNDHKPHFQQDKYLAERLLEDANT 538
Fly 539 NTEVIEVKAEDED--NASQILYSI--ESGNVGDAFKI----GLKTGKITVNQKLDYETITEYELK 595
Fly 596 VRAFD----------GIYDDYTTVVIKIEDVNDNPPVFKQDYS-VTILEETTYDDCILTVEAYDP 649
Fly 650 DIK--------DRNADQHIVYSIHQNDGNRWTIDNSGCLRLVKTLDRDPPNGHKNWQVLIKANDE 706
Fly 707 DGVGTTVSTVKEVTVTLKDINDNAPFLINEMPVYWQENRNPGHVVQ-LQANDYDDTPGAGNFTFG 770
Fly 771 I--DSEATP-----DIKTKFSMDGDYLHA-NVQFDREAQKEYFIPIRISDSGVPRQSAVSILHLV 827
Fly 828 IGDVNDNAMSEGSSRIFIYNYKGEAPETDIGRVFVDDLDDWDLEDKYFEWKDLPHDQFRLNPSTG 892
Fly 893 MITMLVHTAEGEYDLSFVVTEDSMFVPRHSVDAYVTVVVRELPEEAVDKSGSIRFINVTKEEFIS 957
Fly 958 VPRDFQSPDALSLKDRLQLSLAKLFNTSVSNVDVFTVLQNENHTLDVRFSAHGSPYYAPEKLNGI 1022
Fly 1023 VAQNQQRLENELDLQMLMVNIDECLIEKFKCEESCTNELHKSSVPYMIYSNTTSFVGVNAFVQAQ 1087
Fly 1088 CVCEAPLMRRCLNGGSPRYGENDVCDCIDGFTGPHCELVSVAFYGSGYAFYEPIAACNNTKISLE 1152
Fly 1153 ITPQIDQGLIMYLGPLNFNPLLAISDFLALELDNGYPVLTVDYGSGAIRIRHQHIKMVADRTYQL 1217
Fly 1218 DIILQRTSIEMTVDNCRLSTCQTLGAPIGPNEFLNVNAPLQLGGTPVDLEQLGRQLNWTHVPNQK 1282
Fly 1283 GFFGCIRNLTINEQTYNLGMPSVFRNIDSGCQQSVAVAFSFGIDRNFIIAIIVCLALLLIILLAV 1347
Fly 1348 VVQKKQKNGWHEKDID-DIRETIINYEDEGGGERDTD-YDLNVLRTQPFYEEKLYKDP------- 1403
Fly 1404 ---------HALQGNMRDPNDIPDIA---DFLGDKKENCDRDVGATTVDDVRHYAYEGDGNSDGS 1456
Fly 1457 LSSLASCTDDGDLNFDYLSNFGPRFRKLADMYGEEPSDTDS 1497 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
shg | NP_476722.1 | Cadherin_repeat | 93..191 | CDD:206637 | |
Cadherin_repeat | 200..292 | CDD:206637 | |||
CA | 332..410 | CDD:214520 | 16/57 (28%) | ||
Cadherin_repeat | 417..518 | CDD:206637 | 37/107 (35%) | ||
Cadherin_repeat | 531..619 | CDD:206637 | 30/105 (29%) | ||
Cadherin_repeat | 627..729 | CDD:206637 | 23/110 (21%) | ||
Cadherin_repeat | 736..834 | CDD:206637 | 24/106 (23%) | ||
LamG | 1127..1294 | CDD:238058 | 2/166 (1%) | ||
Cadherin_C | 1358..1489 | CDD:279398 | 52/151 (34%) | ||
Cdh22 | NP_062034.2 | Cadherin_repeat | 80..160 | CDD:206637 | 14/54 (26%) |
Cadherin_repeat | 169..270 | CDD:206637 | 37/109 (34%) | ||
Cadherin_repeat | 279..387 | CDD:206637 | 31/109 (28%) | ||
Cadherin_repeat | 398..492 | CDD:206637 | 23/107 (21%) | ||
Cadherin_repeat | 499..597 | CDD:206637 | 28/171 (16%) | ||
Cadherin_C | 645..804 | CDD:395833 | 53/160 (33%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 696..726 | 4/29 (14%) | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |