Sequence 1: | NP_476722.1 | Gene: | shg / 37386 | FlyBaseID: | FBgn0003391 | Length: | 1507 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_859010.1 | Gene: | Dsg1b / 225256 | MGIID: | 2664357 | Length: | 1060 | Species: | Mus musculus |
Alignment Length: | 1236 | Identity: | 231/1236 - (18%) |
---|---|---|---|
Similarity: | 371/1236 - (30%) | Gaps: | 540/1236 - (43%) |
- Green bases have known domain annotations that are detailed below.
Fly 372 LDYEA--ITDYTLTMIVRNTHELGTEHQIKIQVEDVNDNIPYYTEVKSGTIL------------- 421
Fly 422 --------ENEPPGTPVMQVRAFDMDGTSANNIVSFELA----DNREY--FTIDPNTGNITALTT 472
Fly 473 FDREERDFYNVKVIASDNSPSSLFDNGEPNRGHQVFRISIGDKNDHKPHFQQDKYLAERLLEDAN 537
Fly 538 TNTEVIEVKAEDEDNA----SQILYSIESGNVGDA--FKIGLKTGKI-TVNQKLDYETITEYELK 595
Fly 596 VRAF--DGIYDDYTT---VVIKIEDVNDNPPVFKQ-DYSVTILEETTYDDCILTVEAYDPDIKDR 654
Fly 655 NADQHIVYSIHQNDGNRWTID-----NSGCLRLVKTLDRDPPNGHKNWQVLIKANDEDGVGTTVS 714
Fly 715 -----------TVKEVTVTLKDINDNAPFLINEMPVYWQENRNPGHVVQLQANDYDDTPGAGNFT 768
Fly 769 FGIDSEATPDIKTKFSMDGDYLHANVQFDREAQKEYFIPIRISDSGVPRQSAVSILHLVIGDVND 833
Fly 834 NAMSEGSSRIFIYNYKGE--APETDIGRVFVDDLDDWDLEDKYFEWKDLPHDQFRLNPSTGMITM 896
Fly 897 LVHTAEGEYDLSFVVTEDSMFVPRHSVDAYVTVVVRELPEEAVDKSGSIRFINVTKEEFISVPRD 961
Fly 962 FQSPDALSLKDRLQLS-----LAKLFNT--------------SVSNVDVFTVLQNENHTLDVRFS 1007
Fly 1008 AHGSPYYAPEKL----------NGIVAQNQQRLENELDLQMLMVNIDECLIEKFKCEESCTNELH 1062
Fly 1063 KSSVPYMIYSNTTSF--VGVNAFVQAQCVCE-APLMRRCLNGGSPRYGENDVCDCIDGFTGPHCE 1124
Fly 1125 LVSVAFYGSGYAFYEPIAACNNTKI---SLE-ITPQIDQGL----IMYLGPLNFNPLLAISDFLA 1181
Fly 1182 LELDNGYPVLTVDYGSGAIRIRHQHIKMVADRTYQLDIILQRTSIEMTVDNCRLSTCQTLGAPIG 1246
Fly 1247 PNEFLNVNAPLQLGGTPVDLEQLGRQLNWTHVPNQKGFFGCIRNLTINEQTYNLGMPSVFRNIDS 1311
Fly 1312 GCQQSVAVAFSFGIDRNFIIAIIVCLALLLIILLAVVVQKKQKNGWHEKDIDDIRETIINYEDEG 1376
Fly 1377 GGERDTDYDLNVLRTQPFYEEKLYKDPHALQGNMRDPNDIPDIADFLGDKKENCDRDVGATTVDD 1441
Fly 1442 VRHYAYEGDGNSDGSLSSLASCTDDG-DLNFDYLSNFGPRFRKLADM-YGEEPSDTDSNVDDDQG 1504
Fly 1505 W 1505 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
shg | NP_476722.1 | Cadherin_repeat | 93..191 | CDD:206637 | |
Cadherin_repeat | 200..292 | CDD:206637 | |||
CA | 332..410 | CDD:214520 | 13/39 (33%) | ||
Cadherin_repeat | 417..518 | CDD:206637 | 25/127 (20%) | ||
Cadherin_repeat | 531..619 | CDD:206637 | 35/99 (35%) | ||
Cadherin_repeat | 627..729 | CDD:206637 | 30/117 (26%) | ||
Cadherin_repeat | 736..834 | CDD:206637 | 10/97 (10%) | ||
LamG | 1127..1294 | CDD:238058 | 21/174 (12%) | ||
Cadherin_C | 1358..1489 | CDD:279398 | 29/132 (22%) | ||
Dsg1b | NP_859010.1 | CA | 73..155 | CDD:214520 | 21/92 (23%) |
Cadherin_repeat | 165..265 | CDD:206637 | 35/100 (35%) | ||
Cadherin_repeat | 273..379 | CDD:206637 | 30/115 (26%) | ||
Cadherin_repeat | 391..483 | CDD:206637 | 29/219 (13%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 490..560 | 13/107 (12%) | |||
Cadherin_C | 667..782 | CDD:279398 | 33/195 (17%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 792..811 | 3/7 (43%) | |||
Desmoglein repeat 1 | 835..861 | ||||
Desmoglein repeat 2 | 862..891 | ||||
Desmoglein repeat 3 | 892..921 | ||||
Desmoglein repeat 4 | 922..949 | ||||
Desmoglein repeat 5 | 950..978 | ||||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.000 |