DRSC/TRiP Functional Genomics Resources

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Protein Alignment shg and FAT2

DIOPT Version :9

Sequence 1:NP_476722.1 Gene:shg / 37386 FlyBaseID:FBgn0003391 Length:1507 Species:Drosophila melanogaster
Sequence 2:NP_001438.1 Gene:FAT2 / 2196 HGNCID:3596 Length:4349 Species:Homo sapiens


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
shgNP_476722.1 Cadherin_repeat 93..191 CDD:206637
Cadherin_repeat 200..292 CDD:206637
CA 332..410 CDD:214520
Cadherin_repeat 417..518 CDD:206637
Cadherin_repeat 531..619 CDD:206637
Cadherin_repeat 627..729 CDD:206637
Cadherin_repeat 736..834 CDD:206637
LamG 1127..1294 CDD:238058
Cadherin_C 1358..1489 CDD:279398
FAT2NP_001438.1 Cadherin_repeat 462..560 CDD:206637
Cadherin_repeat 570..659 CDD:206637
Cadherin_repeat 719..816 CDD:206637
Cadherin_repeat 825..921 CDD:206637
Cadherin_repeat 931..1026 CDD:206637
Cadherin_repeat 1038..1133 CDD:206637
Cadherin_repeat 1141..1238 CDD:206637
Cadherin_repeat 1247..1335 CDD:206637
Cadherin_repeat 1354..1444 CDD:206637
Cadherin_repeat 1453..1551 CDD:206637
Cadherin_repeat 1559..1650 CDD:206637
Cadherin_repeat 1664..1754 CDD:206637
Cadherin_repeat 1762..1867 CDD:206637
Cadherin_repeat 1887..1963 CDD:206637
Cadherin_repeat <1998..2066 CDD:206637
Cadherin_repeat 2074..2163 CDD:206637
Cadherin_repeat 2176..2268 CDD:206637
Cadherin_repeat 2276..2375 CDD:206637
Cadherin_repeat 2383..2475 CDD:206637
Cadherin_repeat 2486..2581 CDD:206637
Cadherin_repeat 2589..2682 CDD:206637
Cadherin_repeat 2696..2793 CDD:206637
Cadherin_repeat 2801..2902 CDD:206637
Cadherin_repeat 2910..3007 CDD:206637
Cadherin_repeat 3016..3109 CDD:206637
Cadherin_repeat 3120..3209 CDD:206637
Cadherin_repeat 3224..3317 CDD:206637
Cadherin_repeat 3325..3422 CDD:206637
Cadherin_repeat 3431..3522 CDD:206637
Cadherin_repeat 3535..3619 CDD:206637
Laminin_G_2 3800..3921 CDD:280389
EGF_CA 3949..3984 CDD:238011
Cadherin_repeat 37..143 CDD:206637
Cadherin_repeat 152..247 CDD:206637
Cadherin_repeat 366..454 CDD:206637
EGF 3990..4020 CDD:278437
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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