DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment shg and FAT1

DIOPT Version :9

Sequence 1:NP_476722.1 Gene:shg / 37386 FlyBaseID:FBgn0003391 Length:1507 Species:Drosophila melanogaster
Sequence 2:XP_005262891.1 Gene:FAT1 / 2195 HGNCID:3595 Length:4600 Species:Homo sapiens


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
shgNP_476722.1 Cadherin_repeat 93..191 CDD:206637
Cadherin_repeat 200..292 CDD:206637
CA 332..410 CDD:214520
Cadherin_repeat 417..518 CDD:206637
Cadherin_repeat 531..619 CDD:206637
Cadherin_repeat 627..729 CDD:206637
Cadherin_repeat 736..834 CDD:206637
LamG 1127..1294 CDD:238058
Cadherin_C 1358..1489 CDD:279398
FAT1XP_005262891.1 Cadherin_repeat 38..144 CDD:206637
Cadherin_repeat 153..252 CDD:206637
E_set 277..356 CDD:298831
Cadherin_repeat 371..459 CDD:206637
Cadherin_repeat 468..565 CDD:206637
Cadherin_repeat 575..663 CDD:206637
Cadherin_repeat 724..818 CDD:206637
Cadherin_repeat 826..923 CDD:206637
Cadherin_repeat 932..1016 CDD:206637
Cadherin_repeat 1042..1135 CDD:206637
Cadherin_repeat 1143..1241 CDD:206637
Cadherin_repeat 1250..1344 CDD:206637
Cadherin_repeat 1363..1452 CDD:206637
Cadherin_repeat 1461..1558 CDD:206637
Cadherin_repeat 1566..1658 CDD:206637
Cadherin_repeat 1671..1761 CDD:206637
Cadherin_repeat 1769..1874 CDD:206637
Cadherin_repeat 1895..1970 CDD:206637
Cadherin_repeat 1983..2077 CDD:206637
Cadherin_repeat 2085..2174 CDD:206637
Cadherin_repeat 2187..2279 CDD:206637
Cadherin_repeat 2287..2386 CDD:206637
Cadherin_repeat 2394..2488 CDD:206637
Cadherin_repeat 2496..2592 CDD:206637
Cadherin_repeat 2601..2694 CDD:206637
Cadherin_repeat 2708..2805 CDD:206637
Cadherin_repeat 2813..2913 CDD:206637
Cadherin_repeat 2922..3019 CDD:206637
Cadherin_repeat 3028..3121 CDD:206637
Cadherin_repeat 3129..3226 CDD:206637
Cadherin_repeat 3234..3331 CDD:206637
Cadherin_repeat 3339..3436 CDD:206637
Cadherin_repeat 3445..3536 CDD:206637
Cadherin_repeat 3561..3634 CDD:206637
LamG 3854..3985 CDD:214598
EGF_CA 4016..4050 CDD:238011
EGF_CA 4053..4088 CDD:238011
EGF 4093..4123 CDD:278437
EGF_CA 4127..4163 CDD:238011
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.