Protein Alignment shg and cdh-1

DIOPT Version :9

• Sequence 1: NP_476722.1
• Gene: shg / 37386
• FlyBaseID: FBgn0003391
• Length: 1507
• Species: Drosophila melanogaster
• Sequence 2: NP_497641.2
• Gene: cdh-1 / 187783
• WormBaseID: WBGene00019994
• Length: 2779
• Species: Caenorhabditis elegans
• Identity: / - (0%)
• Similarity: / - (0%)
• Gaps: / - (0%)

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
shg	NP_476722.1	Cadherin_repeat	93..191	CDD:206637
		Cadherin_repeat	200..292	CDD:206637
		CA	332..410	CDD:214520
		Cadherin_repeat	417..518	CDD:206637
		Cadherin_repeat	531..619	CDD:206637
		Cadherin_repeat	627..729	CDD:206637
		Cadherin_repeat	736..834	CDD:206637
		LamG	1127..1294	CDD:238058
		Cadherin_C	1358..1489	CDD:279398
cdh-1	NP_497641.2	Cadherin_repeat	29..118	CDD:206637
		Cadherin_repeat	129..229	CDD:206637
		Cadherin_repeat	238..328	CDD:206637
		Cadherin_repeat	459..532	CDD:206637
		Cadherin_repeat	546..637	CDD:206637
		Cadherin_repeat	645..733	CDD:206637
		Cadherin_repeat	746..833	CDD:206637
		Cadherin_repeat	843..938	CDD:206637
		Cadherin_repeat	947..1041	CDD:206637
		Cadherin_repeat	1051..1136	CDD:206637
		Cadherin_repeat	1337..1426	CDD:206637
		Cadherin_repeat	1445..>1515	CDD:206637
		Cadherin_repeat	1638..1723	CDD:206637
		Cadherin_repeat	1734..1817	CDD:206637
		Cadherin_repeat	1836..1923	CDD:206637
		Cadherin_repeat	1934..2025	CDD:206637
		Cadherin_repeat	2034..2120	CDD:206637
		Cadherin_repeat	2135..2226	CDD:206637
		Cadherin_repeat	2235..2330	CDD:206637
		Cadherin_repeat	2345..2437	CDD:206637
		Cadherin_repeat	2446..2534	CDD:206637

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	1	1.000