| Sequence 1: | NP_476722.1 | Gene: | shg / 37386 | FlyBaseID: | FBgn0003391 | Length: | 1507 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_001021650.1 | Gene: | hmr-1 / 173007 | WormBaseID: | WBGene00001980 | Length: | 2920 | Species: | Caenorhabditis elegans |
| Alignment Length: | 1709 | Identity: | 443/1709 - (25%) |
|---|---|---|---|
| Similarity: | 685/1709 - (40%) | Gaps: | 499/1709 - (29%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 51 ARLLLGVIVAISLLSPALALHSPPDKNFSGDNRKPAFKNCAGYAPKVKEEQPENTY------VLT 109
Fly 110 VEAVDPD--PDQVIRYSIVQSPFERPKFFI--------NPSTGVIFTTHTFDRDEPIHEKFVFVT 164
Fly 165 VQATDNGLPPLDDVCTFNVTIEDINDNAPAFNKARYDESMSENAQPDAVVMTISASDFDDGNNSL 229
Fly 230 VEYEI--------LRERDFQYFK-IDKESGIIYLKRPIDKRPGQSYAIIVRAYNVVPDPPQDAQI 285
Fly 286 EVRIRVVESSIKPPSF-VNPIDTP-IYLKENLKNFTHPIATLRAVSNMPDK-PEVIFELNTGRTE 347
Fly 348 QTNSKNTF-VFNQI--GNE-VTISLGKTLDYEAITDYTLTMIVRN-THELGTEHQIKIQVEDVND 407
Fly 408 NIPYYT-EVKSGTILENEPP--------GTPVMQVRAFDMDGTSANNIVSFEL-----ADNREYF 458
Fly 459 TIDPNTGNITALTTFDREERDFYNVKVIASDNSPSSLFDNGEPNRGHQVFRISIGDKNDHKPHFQ 523
Fly 524 QDKYLAERLLEDANTNTEVIEVKAEDEDNASQILYSIESGNVGDAFKIGLKT--GKITVNQKLDY 586
Fly 587 ETITEYELKVRAFDGIYDDYTTVVIKIEDVNDNPPVFKQD-YSVTILEE-TTYDDCILTVEAYDP 649
Fly 650 DIKDRNADQHIVYSIH-QNDGNRWTIDN-SGCLRLVKTLDRDPPNGHKNWQVLIKANDEDGVGTT 712
Fly 713 VSTVKEVTVTLKDINDNAPFLINEMPVYWQENRNPGH-----VVQLQANDYDD-TPGAGNFTFGI 771
Fly 772 DSEATPDIKTKFSMDGD--YLHANVQFDRE--AQKEYFIPIRISDSGVP---------------- 816
Fly 817 -------------------------------------------------------------RQSA 820
Fly 821 VSIL------------------------------------------------------------- 824
Fly 825 ----------------------------------------------------------------- 824
Fly 825 ----------------------------------------------------------------- 824
Fly 825 ------------------------------------------------------------HLVIG 829
Fly 830 DVNDNAMSEGSSRIFIYNYKGEAPETDIGRVFVDDLDDWDLEDKYFEWKDLPHDQFRLNPSTGMI 894
Fly 895 TMLVHTAEGEYDLSFVVTEDSMFVPRHSVDA--YVTVVVRELPEEAVDKSGSIRFINVTKEEFIS 957
Fly 958 VPRDFQSPDA--LSLKDRLQLSLAKLFNTSVSNVDVFTV------LQNEN-HTLDVRFSAHGSPY 1013
Fly 1014 YAPEKLNGIVAQNQQRLENELDLQMLMVNIDECLIEKF-KCEESCTNELHKSSVPY---MIYSNT 1074
Fly 1075 TSFVGVNAFVQAQCVCEAPLMRR--------CLNGG-----SPRYGENDVCDC-IDGFTGPHCEL 1125
Fly 1126 VSVAFYGSGYAFYEPIAACNNTKISLEITPQIDQGLIMYLGPLNF---NPLLAISDFLALELDNG 1187
Fly 1188 YPVLTVDYGSGAIRIRHQHIKMVADRTYQLDIILQRTS--IEMTVDNCRL-------STCQT-LG 1242
Fly 1243 APIGPNEFLNVNAPLQLGGTPVDLEQLGRQLNWTHVPNQKGFFGCIRNLTINEQTYNLGMPSVFR 1307
Fly 1308 NIDSGCQQSVAVAFSFGID 1326 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| shg | NP_476722.1 | Cadherin_repeat | 93..191 | CDD:206637 | 37/113 (33%) |
| Cadherin_repeat | 200..292 | CDD:206637 | 22/100 (22%) | ||
| CA | 332..410 | CDD:214520 | 24/83 (29%) | ||
| Cadherin_repeat | 417..518 | CDD:206637 | 38/113 (34%) | ||
| Cadherin_repeat | 531..619 | CDD:206637 | 33/89 (37%) | ||
| Cadherin_repeat | 627..729 | CDD:206637 | 36/104 (35%) | ||
| Cadherin_repeat | 736..834 | CDD:206637 | 37/435 (9%) | ||
| LamG | 1127..1294 | CDD:238058 | 51/179 (28%) | ||
| Cadherin_C | 1358..1489 | CDD:279398 | |||
| hmr-1 | NP_001021650.1 | Cadherin_repeat | 431..521 | CDD:206637 | |
| Cadherin_repeat | 534..638 | CDD:206637 | |||
| Cadherin_repeat | 647..742 | CDD:206637 | |||
| Cadherin_repeat | 752..861 | CDD:206637 | 6/31 (19%) | ||
| Cadherin_repeat | 875..975 | CDD:206637 | 36/109 (33%) | ||
| Cadherin_repeat | 983..1085 | CDD:206637 | 23/102 (23%) | ||
| Cadherin_repeat | 1103..1206 | CDD:206637 | 30/103 (29%) | ||
| Cadherin_repeat | 1216..1331 | CDD:206637 | 38/114 (33%) | ||
| Cadherin_repeat | 1340..1432 | CDD:206637 | 34/93 (37%) | ||
| Cadherin_repeat | 1443..1542 | CDD:206637 | 35/102 (34%) | ||
| Cadherin_repeat | 1553..1657 | CDD:206637 | 28/103 (27%) | ||
| Cadherin_repeat | 1666..1768 | CDD:206637 | 4/101 (4%) | ||
| Cadherin_repeat | 1779..1868 | CDD:206637 | 0/88 (0%) | ||
| EGF_CA | 2250..2283 | CDD:238011 | 9/36 (25%) | ||
| LamG | 2286..2459 | CDD:238058 | 51/179 (28%) | ||
| LamG | 2533..2679 | CDD:304605 | |||
| Cadherin_C | 2812..>2919 | CDD:279398 | |||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 1 | 1.000 | 187 | 1.000 | Domainoid score | I1975 |
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 1 | 1.010 | - | - | D4879at33208 | |
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 3 | 2.920 | |||||