Sequence 1: | NP_476722.1 | Gene: | shg / 37386 | FlyBaseID: | FBgn0003391 | Length: | 1507 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_034209.2 | Gene: | Dsg1a / 13510 | MGIID: | 94930 | Length: | 1057 | Species: | Mus musculus |
Alignment Length: | 1223 | Identity: | 243/1223 - (19%) |
---|---|---|---|
Similarity: | 368/1223 - (30%) | Gaps: | 517/1223 - (42%) |
- Green bases have known domain annotations that are detailed below.
Fly 372 LDYEA--ITDYTLTMIVRNTHELGTEHQIKIQVEDVNDNIPYYTEVKSGTIL------------- 421
Fly 422 --------ENEPPGTPVMQVRAFDMDGTSANNIVSFELA----DNREY--FTIDPNTGNITALTT 472
Fly 473 FDREERDFYNVKVIASDNSPSSLFDNGEPNRGHQVFRISIGDKNDHKPHFQQDKYLAERLLEDAN 537
Fly 538 TNTEVIEVKAEDEDNA----SQILYSIESGNVGDA--FKIGLKTGKI-TVNQKLDYETITEYELK 595
Fly 596 VRAF--DGIYDDYTT---VVIKIEDVNDNPPVFKQ-DYSVTILEETTYDDCILTVEAYDPDIKDR 654
Fly 655 NADQHIVYSIHQNDGNRWTID-----NSGCLRLVKTLDRDPPNGHKNWQVLIKANDEDGVGTTVS 714
Fly 715 -----------TVKEVTVTLKDINDNAPFLINEMPVYWQENRNPGHVVQLQANDYDDTPGAGNFT 768
Fly 769 FGIDSEATPDIKTKFSMDGDYLHANVQFDREAQKEYFIPIRISDSGVPRQSAVSILHLVIGDVND 833
Fly 834 NAMSEGSSRIFIYNYKGE--APETDIGRVFVDDLDDWDLEDKYFEWKDLPHDQFRLNPSTGMITM 896
Fly 897 LVHTAEGEYDLSFVVTEDSMFVPRHSVDAYVTVVVRELPEEAVDKSGSIRFINVTKEEFISVPRD 961
Fly 962 FQSPDALSLKDRLQLSLAKLFNTSVSNVDVFTVLQNENHTLDVRFSAHGSPYYAPEKLNGIVAQN 1026
Fly 1027 QQRLENELDLQMLMVNIDECLIEKFKCEESCTNELHKSSVPYMIYSNTTSFVGVNAFVQAQCVCE 1091
Fly 1092 APLMRRCLNGGSPRYGENDVCDCIDG-------FTGPHCELVSVAFYGSGYAFYEPIAACNNTKI 1149
Fly 1150 SLEITPQIDQGLIMYLGPLNFNPLLAISDFLALELDNGYPVLTVDYGSGAIRIRHQHIKMVADRT 1214
Fly 1215 YQLDIILQRTSIEMTVDNCRLSTCQTLGAPIGPNEFLNVNAPLQLGGTPVDLEQLGRQLNW-THV 1278
Fly 1279 PNQKGFFG----CIRNLTINEQTYNLGMPSVFRNIDSGCQQSVAVAFSFGIDRNFIIAIIVCLAL 1339
Fly 1340 LLIILLAVVVQKKQKNGWHEKDIDDIRETIINYEDEGGGERDTDYDL-NVLRTQPFYEEKLYKDP 1403
Fly 1404 HALQ---GNMRDPNDIPDIAD-----------FLGDKKENCDRDVGATTVDDVRHYAYEGDGNSD 1454
Fly 1455 GSLSSLASCTDDG-DLNFDYLSNFGPRFRKLADM-YGEEPSDTDSNVDDDQGW 1505 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
shg | NP_476722.1 | Cadherin_repeat | 93..191 | CDD:206637 | |
Cadherin_repeat | 200..292 | CDD:206637 | |||
CA | 332..410 | CDD:214520 | 13/39 (33%) | ||
Cadherin_repeat | 417..518 | CDD:206637 | 25/127 (20%) | ||
Cadherin_repeat | 531..619 | CDD:206637 | 35/99 (35%) | ||
Cadherin_repeat | 627..729 | CDD:206637 | 31/117 (26%) | ||
Cadherin_repeat | 736..834 | CDD:206637 | 10/97 (10%) | ||
LamG | 1127..1294 | CDD:238058 | 26/171 (15%) | ||
Cadherin_C | 1358..1489 | CDD:279398 | 38/147 (26%) | ||
Dsg1a | NP_034209.2 | CA | 73..155 | CDD:214520 | 21/92 (23%) |
Cadherin_repeat | 165..265 | CDD:206637 | 35/100 (35%) | ||
Cadherin_repeat | 273..379 | CDD:206637 | 31/115 (27%) | ||
Cadherin_repeat | 391..483 | CDD:206637 | 29/219 (13%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 490..552 | 20/140 (14%) | |||
Cadherin_C | 664..779 | CDD:279398 | 36/126 (29%) | ||
Desmoglein repeat 1 | 832..858 | ||||
Desmoglein repeat 2 | 859..888 | ||||
Desmoglein repeat 3 | 889..918 | ||||
Desmoglein repeat 4 | 919..946 | ||||
Desmoglein repeat 5 | 947..975 | ||||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.000 |