Sequence 1: | NP_476722.1 | Gene: | shg / 37386 | FlyBaseID: | FBgn0003391 | Length: | 1507 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_031759339.1 | Gene: | LOC100494953 / 100494953 | -ID: | - | Length: | 2999 | Species: | Xenopus tropicalis |
Alignment Length: | 2252 | Identity: | 495/2252 - (21%) |
---|---|---|---|
Similarity: | 788/2252 - (34%) | Gaps: | 853/2252 - (37%) |
- Green bases have known domain annotations that are detailed below.
Fly 8 MSRSYHCINMSATPQAGHLNPAQQQTHQQHKRKCRDLGRRLIPARLLLGVIVAISLLSPALALHS 72
Fly 73 PPDKNFSGDNRKPAFKNCAGYA--PKVKEEQPENTYVLTVEAVDPDP--DQVIRYSIVQSPFERP 133
Fly 134 KFFINPSTGVIFTTHTFDRDEPIHEKFVFVTVQATDNGLPPLDDVCTFNVTIEDINDNAPAFNKA 198
Fly 199 RYDESMSENAQPDAVVMTISASDFDDGNNSLVEYEILRERDFQYFKIDKESGIIYLKRPIDKRPG 263
Fly 264 QSYAIIVRAYNVVPDPPQDAQIEVRIRVVESSIKPPSFVNP---IDTPIYLKENLKNFTHPIATL 325
Fly 326 RAVSNMPDKPEVIFELNTGRTEQTNSKNTFVF--NQIGNEVTISLGKTLDYEAITDYTLTMIVRN 388
Fly 389 TH--ELGTEHQIKIQVEDVNDNIPYYT----EVKSGTILENEPPGTPVMQVRAFDMDGTSANNIV 447
Fly 448 SFELADNRE---YFTIDPNTGNITALTTFDREERDFYNVKVIASDNSPSSLFD-NGEPNRGHQVF 508
Fly 509 RISIGDKNDHKPHFQQDKYLAERLLEDANTNTEVIEVKAEDEDNA--SQILYSIESGNVGDAFKI 571
Fly 572 GLKTGKITVNQKLDYETITEYELKVRAFDGIYDDYTTVVIKIEDVNDNPPVFKQ-DYSVTILEET 635
Fly 636 T----YDDCILTVEAYDPDIKDRNADQH-IVYSIH-QNDGNRWTIDN-SGCLRLVKTLDRDPPNG 693
Fly 694 HKNWQVLIKANDEDGVGTT-----VSTVKEV---------------------------------- 719
Fly 720 ----------------------------------------------------------------- 719
Fly 720 --------TVTLKDINDNAP--------------FLIN-EMPVYWQENRNPGH------------ 749
Fly 750 ----------------------------------------------------------------- 749
Fly 750 -------------------VVQLQANDYDDTPGAGNFTF---------GIDSEAT---------- 776
Fly 777 ---------------------------------------PDIKTKFS----------------MD 786
Fly 787 GDYLHA---------------------NV-------------------QFDREAQKEYFIPIRIS 811
Fly 812 DSGVPRQSAVSILHLVIGDVNDNAMSEGSSRIFIYNYKGEAPETDIGRVFVDDLDDWDLEDKYFE 876
Fly 877 WKDLPHDQFRLNPSTGMITMLVHTAEGEYDLSFVVTEDSMFVPRHSVDAYVTVVVRELPEEAVDK 941
Fly 942 SGSIRFINVTKEEFISVPRDFQSPDALSLKDRLQLSLAKLFNTSVSNVDVFTVLQNE--NHTLDV 1004
Fly 1005 RFSAHGSPYYAPEKLNGIVAQNQQRLENELDLQMLMVNIDECLIEKFKCEESCTNELHKSS---V 1066
Fly 1067 PYMIYSNTTSFVGVNAFVQAQCVCEAPLMRR----------CLNGGSPRYGENDV-CDCIDGFTG 1120
Fly 1121 PHCELVSVAFYGSGYAFYEPIAACNNTKISLEITPQIDQGLIMYLGPLNFNPLLAISDFLALELD 1185
Fly 1186 NGYPVLTVDYGSGAIRIRHQHIKMVADRT-YQLDIILQRTSIEMTVDNCR--------------- 1234
Fly 1235 -LSTCQ-TLGAPIGPNEFLNVNAPLQLGGTPVDLEQLGRQLNWTHVPNQKGFFGCIRNLTINEQT 1297
Fly 1298 YNLGMPSVFRNIDSGC------------------------------------------------- 1313
Fly 1314 ----------------------------------------------------QQSVAVAFSFG-- 1324
Fly 1325 -----------------------IDRNF------------------------------------- 1329
Fly 1330 ----------------------------------------------------------------- 1329
Fly 1330 ----------------------------------------------------------------- 1329
Fly 1330 -----------IIAIIVCLALLLIILLAVVV------QKKQKNG-WH----EKDIDDIRETIINY 1372
Fly 1373 EDEGGGERD---------------------TDYDLNVLRT----------------------QPF 1394
Fly 1395 YEEKLYKDP----HALQGNMRDPNDIPDIADFLGDKKENCDRDVGATTVDDVRHYAYEGDGNSDG 1455
Fly 1456 SLSSLASCTDDGDLNFDYLSNFGPRFRKLADMYGEEPSDTDS 1497 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
shg | NP_476722.1 | Cadherin_repeat | 93..191 | CDD:206637 | 37/101 (37%) |
Cadherin_repeat | 200..292 | CDD:206637 | 19/91 (21%) | ||
CA | 332..410 | CDD:214520 | 24/81 (30%) | ||
Cadherin_repeat | 417..518 | CDD:206637 | 34/104 (33%) | ||
Cadherin_repeat | 531..619 | CDD:206637 | 30/89 (34%) | ||
Cadherin_repeat | 627..729 | CDD:206637 | 40/220 (18%) | ||
Cadherin_repeat | 736..834 | CDD:206637 | 38/307 (12%) | ||
LamG | 1127..1294 | CDD:238058 | 59/184 (32%) | ||
Cadherin_C | 1358..1489 | CDD:279398 | 44/181 (24%) | ||
LOC100494953 | XP_031759339.1 | PHA03247 | <51..374 | CDD:223021 | |
Cadherin_repeat | 475..564 | CDD:206637 | |||
Cadherin_repeat | 575..667 | CDD:206637 | |||
Cadherin_repeat | 681..769 | CDD:206637 | |||
Cadherin_repeat | 778..877 | CDD:206637 | 11/74 (15%) | ||
Cadherin_repeat | 890..986 | CDD:206637 | 36/98 (37%) | ||
Cadherin_repeat | 995..1083 | CDD:206637 | 20/93 (22%) | ||
Cadherin_repeat | 1095..1198 | CDD:206637 | 29/108 (27%) | ||
Cadherin_repeat | 1207..1313 | CDD:206637 | 36/108 (33%) | ||
Cadherin_repeat | 1322..1414 | CDD:206637 | 30/92 (33%) | ||
Cadherin_repeat | 1423..1522 | CDD:206637 | 36/107 (34%) | ||
Cadherin_repeat | 1537..1636 | CDD:206637 | 4/98 (4%) | ||
Cadherin_repeat | 1644..1744 | CDD:206637 | 6/99 (6%) | ||
Cadherin_repeat | 1756..1850 | CDD:206637 | 12/94 (13%) | ||
Cadherin_repeat | 1857..1965 | CDD:206637 | 22/107 (21%) | ||
EGF_CA | 2221..2256 | CDD:238011 | 11/34 (32%) | ||
LamG | 2261..2437 | CDD:238058 | 59/182 (32%) | ||
EGF_CA | <2470..2498 | CDD:238011 | 0/27 (0%) | ||
LamG | 2526..2654 | CDD:214598 | 7/127 (6%) | ||
EGF_CA | <2732..2760 | CDD:238011 | 0/27 (0%) | ||
Cadherin_C | 2809..2994 | CDD:395833 | 46/187 (25%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 167 | 1.000 | Domainoid score | I3800 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D4879at33208 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 2.010 |