DRSC/TRiP Functional Genomics Resources

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Protein Alignment shg and LOC100494953

DIOPT Version :9

Sequence 1:NP_476722.1 Gene:shg / 37386 FlyBaseID:FBgn0003391 Length:1507 Species:Drosophila melanogaster
Sequence 2:XP_031759339.1 Gene:LOC100494953 / 100494953 -ID:- Length:2999 Species:Xenopus tropicalis


Alignment Length:2252 Identity:495/2252 - (21%)
Similarity:788/2252 - (34%) Gaps:853/2252 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 MSRSYHCINMSATPQAGHLNPAQQQTHQQHKRKCRDLGRRLIPARLLLGVIVAISLLSPALALHS 72
            |.|.| .:|:||........|:..::..|                    |:|.|           
 Frog   839 MKRQY-LLNVSAIDDNASGGPSSLRSFTQ--------------------VVVGI----------- 871

  Fly    73 PPDKNFSGDNRKPAFKNCAGYA--PKVKEEQPENTYVLTVEAVDPDP--DQVIRYSIVQSPFERP 133
                 :..::.||.|:.||.|:  ..|.|.||..|:||.|||.|.|.  :..::||::.....|.
 Frog   872 -----YDVNDNKPVFRECAQYSEVTSVLENQPPGTFVLQVEAHDADSGLNGQVKYSLMHREGTRL 931

  Fly   134 KFFINPSTGVIFTTHTFDRDEPIHEKFVFVTVQATDNGLPPLDDVCTFNVTIEDINDNAPAFNKA 198
            .|.|:|.||:|.|..:|||::   ::...::|.|||....||..:|...:.|.|||||.|.|..:
 Frog   932 AFSIDPDTGLITTLQSFDREK---QREYSISVIATDQAQEPLIGICQVTIHIADINDNDPKFENS 993

  Fly   199 RYDESMSENAQPDAVVMTISASDFDDGNNSLVEYEILRERDFQYFKIDKESGIIYLKRPIDKRPG 263
            ||...:.|:.......:..:|.|.|.|.|:.:.|.|.:::. :||:|:..:|.:|:.:||.:.  
 Frog   994 RYQYFLREDTPVGTSFLRATALDDDQGVNAAINYSIAQQQP-EYFRINPSTGWVYVNQPISQT-- 1055

  Fly   264 QSYAIIVRAYNVVPDPPQDAQIEVRIRVVESSIKPPSFVNP---IDTPIYLKENLKNFTHPIATL 325
               ::|.|.........:.:.:|:.:.|.....:||.:...   :..|..:..:.|     |.|:
 Frog  1056 ---SLITRHIVATDGGNRSSNVELTVTVTNVLNQPPQWEQSKYWVSVPEDVARDTK-----IVTV 1112

  Fly   326 RAVSNMPDKPEVIFELNTGRTEQTNSKNTFVF--NQIGNEVTISLGKTLDYEAITDYTLTMIVRN 388
            :|||...| |.|.:.:..|...:||:...|..  |:.|:..::.:.:.|||||...:||.:..:|
 Frog  1113 KAVSPRGD-PRVTYNMEDGLVSETNNPIRFYLKPNRSGSSASVLVSEPLDYEATQFFTLKIRAQN 1176

  Fly   389 TH--ELGTEHQIKIQVEDVNDNIPYYT----EVKSGTILENEPPGTPVMQVRAFDMDGTSANNIV 447
            ..  .|.:...:.:.|.|||||:|::|    ||   |:.|.....|.|.||.|.|:|......:.
 Frog  1177 VAAVPLASFAIVYVNVTDVNDNVPFFTSSAYEV---TVPEGAEIDTSVAQVLATDLDSGLHGKVT 1238

  Fly   448 SFELADNRE---YFTIDPNTGNITALTTFDREERDFYNVKVIASDNSPSSLFD-NGEPNRGHQVF 508
            ...|.|..|   :|:||..:|.|...:|||||::..|.::|.:.|:|.|:..: .|:||......
 Frog  1239 YVILRDGSEDHKFFSIDSESGVIYTRSTFDREKQSSYLIEVQSQDSSESARPEKQGQPNSDTAYV 1303

  Fly   509 RISIGDKNDHKPHFQQDKYLAERLLEDANTNTEVIEVKAEDEDNA--SQILYSIESGNVGDAFKI 571
            ||.:.|.||:.|.|...:| ...:.||.:....||.|.|.|||..  :::.|.|.:||....|.:
 Frog  1304 RIFVSDVNDNAPRFPMQRY-ETSVEEDKDVGYVVITVNASDEDEGANAKLRYQITNGNSKGIFDV 1367

  Fly   572 GLKTGKITVNQKLDYETITEYELKVRAFDGIYDDYTTVVIKIEDVNDNPPVFKQ-DYSVTILEET 635
            ..:.|.|.:.|.|:||..|::||::.|.||.::::|.|:|.:.::||..|:|.| ::..:|||..
 Frog  1368 DQEIGAIFITQALNYEQDTQFELRLVASDGKWENHTLVLINVINLNDEVPIFSQTEFHGSILEAI 1432

  Fly   636 T----YDDCILTVEAYDPDIKDRNADQH-IVYSIH-QNDGNRWTIDN-SGCLRLVKTLDRDPPNG 693
            |    |   :|.|.|.||   |:.|||. :.||:| |...:.:.||. :|.:.:.|.|||:.   
 Frog  1433 TDLPVY---VLQVSATDP---DQEADQSALQYSLHGQGANSEFIIDQFNGKIYIQKELDREQ--- 1488

  Fly   694 HKNWQVLIKANDEDGVGTT-----VSTVKEV---------------------------------- 719
            ...|:.|:.|.||:|.|.|     :..||:|                                  
 Frog  1489 RATWRFLVLATDENGEGLTGFADVIIDVKDVNDNEPTFLCTTDGCFMGYIPENSPADTTVMEMTA 1553

  Fly   720 ----------------------------------------------------------------- 719
                                                                             
 Frog  1554 FDLDDPKSGRNALLTYRIVQNVQNEINLNLFAIHPSTGSIYTVLGSLDREKNDKYLIVVEAKDGG 1618

  Fly   720 --------TVTLKDINDNAP--------------FLIN-EMPVYWQENRNPGH------------ 749
                    |:.:.||||:||              |.|| |:.|.:..:.:.|.            
 Frog  1619 GLSGTGTATILISDINDHAPVFTQNVYTAMVPENFTINSEVAVLYAWDLDEGENAMMTFSIIGGD 1683

  Fly   750 ----------------------------------------------------------------- 749
                                                                             
 Frog  1684 DDRKFFIETDKIHKRGIIRLRKKMDYERIHERSFNLTVKVEDMDFYSIAYCVIQVEDSNDHAPVF 1748

  Fly   750 -------------------VVQLQANDYDDTPGAGNFTF---------GIDSEAT---------- 776
                               ||.|.|.|.|.... |.|::         |:.|.||          
 Frog  1749 YPAVLEAISLPEDVSIGTTVVHLSAIDLDSGQN-GKFSYHILNSSDVGGLFSVATDGWVVVAGHL 1812

  Fly   777 ---------------------------------------PDIKTKFS----------------MD 786
                                                   |:.:.::|                ..
 Frog  1813 DRETLAEHNLVILATDLGEPALTGSTSVLIIIGDVNDNAPEFEAQYSPMIWENTESPHILQVNKT 1877

  Fly   787 GDYLHA---------------------NV-------------------QFDREAQKEYFIPIRIS 811
            ...||.                     ||                   .||||..:.:::||.|:
 Frog  1878 STLLHVRDNDTEVNGAPFAFSLVHDPFNVHDFSLQDLHNGSAIITVLRSFDREVHQVFYLPILIT 1942

  Fly   812 DSGVPRQSAVSILHLVIGDVNDNAMSEGSSRIFIYNYKGEAPETDIGRVFVDDLDDWDLEDKYFE 876
            |||.|..|:.:.|.::|||:||:..|.|.....:|:|||..|...:|:|...|||:|:.:..|.|
 Frog  1943 DSGNPPLSSTNTLTILIGDINDHPHSSGHLDCTVYSYKGILPTVTLGKVPAPDLDEWEHKMYYLE 2007

  Fly   877 WKDLPHDQFRLNPSTGMITMLVHTAEGEYDLSFVVTEDSMFVPRHSVDAYVTVVVRELPEEAVDK 941
            .|.   ..|.||.:||::||......|.|.|...|::.:.    ..|.:.|.:||.::.|||...
 Frog  2008 GKS---RVFSLNEATGLLTMKEGAIPGVYKLRVKVSDGTW----PDVISTVRIVVHDITEEAALN 2065

  Fly   942 SGSIRFINVTKEEFISVPRDFQSPDALSLKDRLQLSLAKLFNTSVSNVDVFTVLQNE--NHTLDV 1004
            :.|:|....|.|:|:..|     ||.:|..:.::..|.::....:.|:.:|:||...  :..:|:
 Frog  2066 AISVRISGFTAEDFVLRP-----PDKISKYELMKYLLLEILQAELDNIHIFSVLNTPGLSGCMDI 2125

  Fly  1005 RFSAHGSPYYAPEKLNGIVAQNQQRLENELDLQMLMVNIDECLIEKFKCEESCTNELHKSS---V 1066
            .|:..|...:..||||||||.:::::|:.|.:|:..:...||  |..||... |..|.:||   .
 Frog  2126 WFAVSGDTRHQAEKLNGIVASSREKIESTLGVQVTQIGEYEC--ENVKCSHQ-TGCLVRSSYKQT 2187

  Fly  1067 PYMIYSNTTSFVGVNAFVQAQCVCEAPLMRR----------CLNGGSPRYGENDV-CDCIDGFTG 1120
            |.||.:.:.||..|....:|.|.|.:...:.          |||||....|.... |:|...|.|
 Frog  2188 PTMITAGSVSFGSVTILTKALCSCPSREHQHLSCSSYERNPCLNGGICVDGNMGYRCECPLSFHG 2252

  Fly  1121 PHCELVSVAFYGSGYAFYEPIAACNNTKISLEITPQIDQGLIMYLGPLNFNPLLAISDFLALELD 1185
            |.|:.....|.|.|||::.|:|.|..::|||:...:...||:::.||::.:......||:||||.
 Frog  2253 PECQQTKHTFIGQGYAWFPPMALCYESQISLDFITEKGNGLLLFNGPMSPSKYRQTEDFIALELQ 2317

  Fly  1186 NGYPVLTVDYGSGAIRIRHQHIKMVADRT-YQLDIILQRTSIEMTVDNCR--------------- 1234
            ||.|:|.:::|||.:.::....:.:|||. :.:.|......::|.:|:|.               
 Frog  2318 NGSPLLAINHGSGTLLLQFSTKQNLADRRWHNIRIESNGKKVKMILDHCSDALANEADGIRQPLH 2382

  Fly  1235 -LSTCQ-TLGAPIGPNEFLNVNAPLQLGGTPVDLEQLGRQLNWTHVPNQKGFFGCIRNLTINEQT 1297
             .|:|: :.|.| |...||:|..||||||....|..|...|.::      ||.||:|||.::.:.
 Frog  2383 DRSSCEVSTGTP-GNKRFLDVYQPLQLGGVKHVLPSLHPALQFS------GFIGCLRNLKVDSKV 2440

  Fly  1298 YNLGMPSVFRNIDSGC------------------------------------------------- 1313
            |:|..|....|...||                                                 
 Frog  2441 YDLEQPLESLNSIPGCTMTDGLCAVTGSPPCGGHGFCISDLSSIRCHCHPGYHGDNCETVLQEWN 2505

  Fly  1314 ----------------------------------------------------QQSVAVAFSFG-- 1324
                                                                :.:.||.|:||  
 Frog  2506 FEKDSWIHYQLHILPSLHSLSVQLMVRTRMASCTILSFVSTNKSSFLRLEVVEGNFAVRFNFGER 2570

  Fly  1325 -----------------------IDRNF------------------------------------- 1329
                                   .|.:|                                     
 Frog  2571 EHLITLPALRIDHGQWTSLSFERYDNSFTLMINKGGGDHELTSVMGTSRLFDVDSSSILLGTSLL 2635

  Fly  1330 ----------------------------------------------------------------- 1329
                                                                             
 Frog  2636 QGGRNDFQGCLRDIRLNGRHLPLDGLENGYSSTVSVQGVSRGCHSDACRSQPCQSPLNCIDLWRK 2700

  Fly  1330 ----------------------------------------------------------------- 1329
                                                                             
 Frog  2701 YECRCPADEVEVINNMTGQKHCYPSPCMRWSCRNGGTCVAQSHQKYVCQCRDGYKGRICESIQIN 2765

  Fly  1330 -----------IIAIIVCLALLLIILLAVVV------QKKQKNG-WH----EKDIDDIRETIINY 1372
                       |:||.:||.:.:.:|::..|      .|..|.| :|    .:..:||||::||:
 Frog  2766 TAKMIGLSSGSILAISMCLLIFIALLVSYTVWSQWGSSKFHKGGVYHIPPEHESWEDIRESVINF 2830

  Fly  1373 EDEGGGERD---------------------TDYDLNVLRT----------------------QPF 1394
            .:|.|.|.:                     ..||.:.|:.                      ||.
 Frog  2831 SEESGIEHNQCWKKASKASGEVVHKSTKITNGYDKHKLKRPLRENVQQLCSSENDLVLPRPHQPA 2895

  Fly  1395 YEEKLYKDP----HALQGNMRDPNDIPDIADFLGDKKENCDRDVGATTVDDVRHYAYEGDGNSDG 1455
            .|....|..    |.||  :...|..|....::.......|.|:.:...|.:..|..||.|:..|
 Frog  2896 EESHTGKSTNATFHKLQ--ISTENRHPSFQFYVPQMLWAADNDMKSHPPDLLHSYTTEGQGSPTG 2958

  Fly  1456 SLSSLASCTDDGDLNFDYLSNFGPRFRKLADMYGEEPSDTDS 1497
            |||||.|.:.|.|.|:|.|..:|.:|.:|.::| ..|||.|:
 Frog  2959 SLSSLDSSSTDEDFNYDVLQEWGSKFDRLKELY-RSPSDKDT 2999

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
shgNP_476722.1 Cadherin_repeat 93..191 CDD:206637 37/101 (37%)
Cadherin_repeat 200..292 CDD:206637 19/91 (21%)
CA 332..410 CDD:214520 24/81 (30%)
Cadherin_repeat 417..518 CDD:206637 34/104 (33%)
Cadherin_repeat 531..619 CDD:206637 30/89 (34%)
Cadherin_repeat 627..729 CDD:206637 40/220 (18%)
Cadherin_repeat 736..834 CDD:206637 38/307 (12%)
LamG 1127..1294 CDD:238058 59/184 (32%)
Cadherin_C 1358..1489 CDD:279398 44/181 (24%)
LOC100494953XP_031759339.1 PHA03247 <51..374 CDD:223021
Cadherin_repeat 475..564 CDD:206637
Cadherin_repeat 575..667 CDD:206637
Cadherin_repeat 681..769 CDD:206637
Cadherin_repeat 778..877 CDD:206637 11/74 (15%)
Cadherin_repeat 890..986 CDD:206637 36/98 (37%)
Cadherin_repeat 995..1083 CDD:206637 20/93 (22%)
Cadherin_repeat 1095..1198 CDD:206637 29/108 (27%)
Cadherin_repeat 1207..1313 CDD:206637 36/108 (33%)
Cadherin_repeat 1322..1414 CDD:206637 30/92 (33%)
Cadherin_repeat 1423..1522 CDD:206637 36/107 (34%)
Cadherin_repeat 1537..1636 CDD:206637 4/98 (4%)
Cadherin_repeat 1644..1744 CDD:206637 6/99 (6%)
Cadherin_repeat 1756..1850 CDD:206637 12/94 (13%)
Cadherin_repeat 1857..1965 CDD:206637 22/107 (21%)
EGF_CA 2221..2256 CDD:238011 11/34 (32%)
LamG 2261..2437 CDD:238058 59/182 (32%)
EGF_CA <2470..2498 CDD:238011 0/27 (0%)
LamG 2526..2654 CDD:214598 7/127 (6%)
EGF_CA <2732..2760 CDD:238011 0/27 (0%)
Cadherin_C 2809..2994 CDD:395833 46/187 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 167 1.000 Domainoid score I3800
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D4879at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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