Sequence 1: | NP_476722.1 | Gene: | shg / 37386 | FlyBaseID: | FBgn0003391 | Length: | 1507 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_002934429.3 | Gene: | LOC100493382 / 100493382 | -ID: | - | Length: | 2539 | Species: | Xenopus tropicalis |
Alignment Length: | 2155 | Identity: | 474/2155 - (21%) |
---|---|---|---|
Similarity: | 752/2155 - (34%) | Gaps: | 775/2155 - (35%) |
- Green bases have known domain annotations that are detailed below.
Fly 62 SLLSPALALHSPPDKNFSGDNRKPAFKNCAGYA--PKVKEEQPENTYVLTVEAVDPD--PDQVIR 122
Fly 123 YSIVQSPFERPKFFINPSTGVIFTTHTFDRDEPIHEKFVFVTVQATDNGLPPLDDVCTFNVTIED 187
Fly 188 INDNAPAFNKARYDESMSENAQPDAVVMTISASDFDDGNNSLVEYEILRERDFQYFKIDKESGII 252
Fly 253 YLKRPIDKRPGQSYAIIVRAYNVVPDPPQDAQIEVRIRVVESSIKPPSFVNPIDTPIYLKENLKN 317
Fly 318 FTHPIATLRAVSNMPDKPEVIFELNTGRTEQTNSKNTF--VFNQIGNEVTISLGKTLDYEAITDY 380
Fly 381 TLTMIVRNTH--ELGTEHQIKIQVEDVNDNIPYYT-EVKSGTILENEPPGTPVMQVRAFDMDGTS 442
Fly 443 ANNIVSFELADNRE----YFTIDPNTGNITALTTFDREERDFYNVKVIASDNSPSSL-FDNGEPN 502
Fly 503 RGHQVFRISIGDKNDHKPHFQQDKYLAERLLEDANTNTEVIEVKAEDEDNA--SQILYSIESGNV 565
Fly 566 GDAFKIGLKTGKITVNQKLDYETITEYELKVRAFDGIYDDYTTVVIKIEDVNDNPPVFK-QDYSV 629
Fly 630 TILEE-TTYDDCILTVEAYDPDIKDRNADQHIVYSIHQNDGNR-WTIDNS-GCLRLVKTLDRDPP 691
Fly 692 NGHKNWQVLIKANDEDGVGTT------------------------------------VSTVKEVT 720
Fly 721 ----------------------------------------------------------------- 720
Fly 721 ----------------------------------------------------------------- 720
Fly 721 -----------------------------------------------VTLKDINDNAP-FL---- 733
Fly 734 ----------------------------------------------------------------- 733
Fly 734 ----------------------------INE---------MPVYWQENRNPG--HVVQ----LQA 755
Fly 756 NDYDDTPGAGNFTFGIDSEATPDIKTKFSMDGD---YLHANVQFDREAQKEYFIPIRISDSGVPR 817
Fly 818 QSAVSILHLVIGDVNDNAMSEGSSRIFIYNYKGEAPETDIGRVFVDDLDDWDLEDKYFEWKDLPH 882
Fly 883 DQFRLNPSTGMITMLVHTAEGEYDLSFVVTEDSMFVPRHSVDAYVTVVVRELPEEAVDKSGSIRF 947
Fly 948 INVTKEEFISVPRDFQSPDALSLKDRLQLSLAKLFNTSVSNVDVFTVLQNENHTLDVRFSA-HGS 1011
Fly 1012 PYYAPEKLNGIVAQNQQRLENELDLQMLMVNIDECLIEKFKCEESCTNELHKSSVPYMIYSNTTS 1076
Fly 1077 FVGV--NAFVQAQC--------VCEAPLMRRCLNGGSPRYGENDV-CDCIDGFTGPHCELVSVAF 1130
Fly 1131 YGSGYAFYEPIAACNNTKISLEITPQIDQGLIMYLGPLNFNPLLAISDFLALELDNGYPVLTVDY 1195
Fly 1196 GSGAIRIRHQHIKMVADRT-YQLDIILQRTSIEMTVDNCRLS------------------TCQTL 1241
Fly 1242 GAPIGPNEFLNVNAPLQLGGTPVDLEQLGRQLNWTHVPNQKGFFGCIRNLTINEQTYNLG----- 1301
Fly 1302 ----------------------------------------------------------------M 1302
Fly 1303 PSVF----------------------------------------------------------RNI 1309
Fly 1310 DSG-------------------------------------------------------------- 1312
Fly 1313 ----------------------------------------------------------------- 1312
Fly 1313 ----------------CQQSVAVAFS---------------------------FGIDRNFIIAII 1334
Fly 1335 VCLALLLIILLAVVV----QKKQKN------GWHEKDIDDIRETIINYEDEGGGERD------TD 1383
Fly 1384 YDLNV-----------LRTQPFYEEKLYKDPHALQGNMRDPNDIPDIADFLGDKKENCDRDVG-- 1435
Fly 1436 ----------------ATTVDDVRHYAYEGDGNSDGSLSSLASCTDDGDLNFDYLSNFGPRFRKL 1484
Fly 1485 ADMYGEEPSD 1494 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
shg | NP_476722.1 | Cadherin_repeat | 93..191 | CDD:206637 | 38/101 (38%) |
Cadherin_repeat | 200..292 | CDD:206637 | 20/91 (22%) | ||
CA | 332..410 | CDD:214520 | 23/81 (28%) | ||
Cadherin_repeat | 417..518 | CDD:206637 | 36/105 (34%) | ||
Cadherin_repeat | 531..619 | CDD:206637 | 33/89 (37%) | ||
Cadherin_repeat | 627..729 | CDD:206637 | 36/317 (11%) | ||
Cadherin_repeat | 736..834 | CDD:206637 | 38/115 (33%) | ||
LamG | 1127..1294 | CDD:238058 | 47/185 (25%) | ||
Cadherin_C | 1358..1489 | CDD:279398 | 43/165 (26%) | ||
LOC100493382 | XP_002934429.3 | Cadherin_repeat | 56..138 | CDD:206637 | |
Cadherin_repeat | 150..242 | CDD:206637 | |||
Cadherin_repeat | 256..344 | CDD:206637 | |||
Cadherin_repeat | 353..452 | CDD:206637 | 7/20 (35%) | ||
Cadherin_repeat | 465..561 | CDD:206637 | 37/98 (38%) | ||
Cadherin_repeat | 570..658 | CDD:206637 | 21/93 (23%) | ||
Cadherin_repeat | 670..773 | CDD:206637 | 28/104 (27%) | ||
Cadherin_repeat | 781..888 | CDD:206637 | 36/107 (34%) | ||
Cadherin_repeat | 897..989 | CDD:206637 | 33/92 (36%) | ||
Cadherin_repeat | 998..1096 | CDD:206637 | 29/103 (28%) | ||
Cadherin_repeat | 1108..1203 | CDD:206637 | 4/94 (4%) | ||
Cadherin_repeat | 1216..1311 | CDD:206637 | 3/94 (3%) | ||
Cadherin_repeat | 1325..1417 | CDD:206637 | 1/91 (1%) | ||
Cadherin_repeat | 1425..1532 | CDD:206637 | 38/106 (36%) | ||
Cadherin_repeat | 1553..1625 | CDD:206637 | 26/77 (34%) | ||
EGF_CA | 1787..1822 | CDD:238011 | 14/34 (41%) | ||
LamG | 1826..2005 | CDD:238058 | 47/184 (26%) | ||
LamG | 2096..2217 | CDD:214598 | 3/120 (3%) | ||
EGF | 2247..2273 | CDD:394967 | 0/25 (0%) | ||
EGF | 2288..2319 | CDD:214544 | 4/30 (13%) | ||
Cadherin_C | 2379..2530 | CDD:395833 | 43/159 (27%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 167 | 1.000 | Domainoid score | I3800 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D4879at33208 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.920 |