DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sou and RMD5

DIOPT Version :10

Sequence 1:NP_611536.1 Gene:Sou / 37382 FlyBaseID:FBgn0034573 Length:432 Species:Drosophila melanogaster
Sequence 2:NP_010541.3 Gene:RMD5 / 851842 SGDID:S000002663 Length:421 Species:Saccharomyces cerevisiae


Alignment Length:422 Identity:104/422 - (24%)
Similarity:187/422 - (44%) Gaps:72/422 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 EVLSRAEQLVTTLNSSTQVSQDDPMGDAVSMQVETEPTAPQRLTERQVESVRNALARCHER-VQK 108
            |..|:.::|...||...|               |::|....:|::::.:..:    |..|. ::|
Yeast    35 EFKSQLKKLKAHLNKHIQ---------------ESKPEVYNKLSDKEKQKFK----RKRELIIEK 80

  Fly   109 LSTEHRDLHGSISKIGKAIDRNFSADFSSTMR------VDVLQ----DEENLMLLNKAIAKHYCR 163
            ||...|....|:.|..|.:.:..:....||:.      :|.:.    .:|.:..:|:||..|..|
Yeast    81 LSKSQRQWDHSVKKQIKYVSQQSNRFNKSTLNKLKEFDIDSVYVNKLPKETMENVNEAIGYHILR 145

  Fly   164 QGMDDVARTLIRECKMSPEHAQDVF----DSEREFADIYGIWVKIQKRDLTDALKWAKMYSQQLS 224
            ..:|::.   :.....:.::.:||:    ....||.::..|...::|.|....|||.....:.||
Yeast   146 YSIDNMP---LGNKNEAFQYLKDVYGITNKESTEFIEMGQIVHDLKKGDTESCLKWCSNEMESLS 207

  Fly   225 DRH---SLIEFRLHRMRFMQLVSYG--LDSQREAISYARLNFKKFAVRYEHEIANLMASFIYLPS 284
            ..|   |.::|.|:.:..||:|.:|  ::...:....|.|:.      :.|....||.:.:.|.:
Yeast   208 SNHTALSSLKFDLYTLSAMQIVKHGNPVELYYQITQNAPLDC------FRHREKELMQNVVPLLT 266

  Fly   285 GLENSPYKHFLGQ----------EKWTELSFIFLKDACQLLGISKNSALSVVVNAGCTALPALLN 339
                   |..:||          ::..|.:.:|:|:.|....|..:|.|.::|.:|..:....:.
Yeast   267 -------KSLIGQPIEDIDSKVNKELKECTSLFIKEYCAAKHIFFDSPLFLIVLSGLISFQFFIK 324

  Fly   340 IKQVMQSRQVLGMWNGCDELPIEIDLQPEF--RFHSIFACPILRQQTSEDNPPKKLTCGHVISND 402
            .|.:.:...|  .|...||||.::.| |:|  .||.||.||:|:::|:.:|||..|.|.|:||..
Yeast   325 YKTIRELAHV--DWTTKDELPFDVKL-PDFLTHFHPIFICPVLKEETTTENPPYSLACHHIISKK 386

  Fly   403 ALHKLSVGHIL--KCPYCPVEQNAEEAVRIYF 432
            ||.:||....:  |||||||..:.....::.|
Yeast   387 ALDRLSKNGTITFKCPYCPVNTSMSSTKKVRF 418

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SouNP_611536.1 COG5109 88..432 CDD:227440 94/377 (25%)
RMD5NP_010541.3 COG5109 13..418 CDD:227440 103/420 (25%)

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