DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3295 and RMND5A

DIOPT Version :9

Sequence 1:NP_611536.1 Gene:CG3295 / 37382 FlyBaseID:FBgn0034573 Length:432 Species:Drosophila melanogaster
Sequence 2:NP_073617.1 Gene:RMND5A / 64795 HGNCID:25850 Length:391 Species:Homo sapiens


Alignment Length:432 Identity:175/432 - (40%)
Similarity:260/432 - (60%) Gaps:51/432 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 CSSVEKDLTRVVSKLE---QLHENAEADIGDIATQMSELVEVLSRAEQLVTTLNSSTQVSQDDPM 69
            |.:||::|.:|:.|..   ||.|..          :.||::.....:..:  |.|.   .||..:
Human     4 CVTVERELEKVLHKFSGYGQLCERG----------LEELIDYTGGLKHEI--LQSH---GQDAEL 53

  Fly    70 GDAVSMQVETEPTAPQRLTERQVESVRNALARCHER----VQKLSTEHRDLHGSISKIGKAIDRN 130
            ...:|:                      .|.:|.:|    ||||:::|:|:|.|:|::|||||:|
Human    54 SGTLSL----------------------VLTQCCKRIKDTVQKLASDHKDIHSSVSRVGKAIDKN 96

  Fly   131 FSADFSSTMRVDVLQDEENLMLLNKAIAKHYCRQGMDDVARTLIRECKMSPEHAQDVFDSEREFA 195
            |.:|.|| :.:|.....::..|||:.:.:|:.||||.|||..|.:|..:|.:.:|     :..|.
Human    97 FDSDISS-VGIDGCWQADSQRLLNEVMVEHFFRQGMLDVAEELCQESGLSVDPSQ-----KEPFV 155

  Fly   196 DIYGIWVKIQKRDLTDALKWAKMYSQQLSDRHSLIEFRLHRMRFMQLVSYGLDSQREAISYARLN 260
            ::..|...::.|.|..||:||....:.|..::|.:||:|||:.|:.|:..|..:||||:.||: |
Human   156 ELNRILEALKVRVLRPALEWAVSNREMLIAQNSSLEFKLHRLYFISLLMGGTTNQREALQYAK-N 219

  Fly   261 FKKFAVRYEHEIANLMASFIYLPSGLENSPYKHFLGQEKWTELSFIFLKDACQLLGISKNSALSV 325
            |:.||:.::.:|..||.|.:||..|:|||||.|.|...:|.::..||.:|||.|||:|..|.|||
Human   220 FQPFALNHQKDIQVLMGSLVYLRQGIENSPYVHLLDANQWADICDIFTRDACALLGLSVESPLSV 284

  Fly   326 VVNAGCTALPALLNIKQVMQSRQVLGMWNGCDELPIEIDLQPEFRFHSIFACPILRQQTSEDNPP 390
            ..:|||.|||||:|||.|::.||..|:||..||||||:||..:..:|||||||||||||:::|||
Human   285 SFSAGCVALPALINIKAVIEQRQCTGVWNQKDELPIEVDLGKKCWYHSIFACPILRQQTTDNNPP 349

  Fly   391 KKLTCGHVISNDALHKLSVGHILKCPYCPVEQNAEEAVRIYF 432
            .||.|||:||.|||:|:..|..|||||||:||:..:|.:|:|
Human   350 MKLVCGHIISRDALNKMFNGSKLKCPYCPMEQSPGDAKQIFF 391

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3295NP_611536.1 COG5109 88..432 CDD:227440 158/347 (46%)
LisH 152..181 CDD:128913 13/28 (46%)
CTLH 193..250 CDD:128914 18/56 (32%)
CRA 252..343 CDD:214806 47/90 (52%)
zf-RING_UBOX 377..416 CDD:290181 25/38 (66%)
RMND5ANP_073617.1 COG5109 17..391 CDD:227440 169/417 (41%)
CLTH 153..297 CDD:402305 63/144 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165147970
Domainoid 1 1.000 123 1.000 Domainoid score I5595
eggNOG 1 0.900 - - E1_COG5109
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H5668
Inparanoid 1 1.050 313 1.000 Inparanoid score I2577
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG55101
OrthoDB 1 1.010 - - D576638at33208
OrthoFinder 1 1.000 - - FOG0002102
OrthoInspector 1 1.000 - - otm41683
orthoMCL 1 0.900 - - OOG6_102297
Panther 1 1.100 - - O PTHR12170
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1719
SonicParanoid 1 1.000 - - X1554
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1615.800

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