DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3295 and RMND5B

DIOPT Version :9

Sequence 1:NP_611536.1 Gene:CG3295 / 37382 FlyBaseID:FBgn0034573 Length:432 Species:Drosophila melanogaster
Sequence 2:XP_024301936.1 Gene:RMND5B / 64777 HGNCID:26181 Length:434 Species:Homo sapiens


Alignment Length:472 Identity:171/472 - (36%)
Similarity:252/472 - (53%) Gaps:88/472 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 CSSVEKDLTRVVSKLEQLHENAEADIGDIATQMSELVEVLSRAEQLVTTLNSSTQVSQDDPMGDA 72
            |:.||::|.:|:.|.....::.|..:.::...:.:|     |||.....|       |..|:...
Human     4 CACVERELDKVLQKFLTYGQHCERSLEELLHYVGQL-----RAELASAAL-------QGTPLSAT 56

  Fly    73 VSMQVETEPTAPQRLTERQVESVRNALARC----HERVQKLSTEHRDLHGSISKIGKAIDR---- 129
            :|:                      .:::|    .:.||||:::|:|:|.|:|::||||||    
Human    57 LSL----------------------VMSQCCRKIKDTVQKLASDHKDIHSSVSRVGKAIDRVSTW 99

  Fly   130 -------------------------------------NFSADFSSTMRVDVLQD--EENLMLLNK 155
                                                 ||.::....:. |.:.|  |:...:|..
Human   100 PAPGVGWEHPEAGMYKDSKESQQECPHHQALSLLLRQNFDSEICGVVS-DAVWDAREQQQQILQM 163

  Fly   156 AIAKHYCRQGMDDVARTLIRECKMSPEHAQDVFDSEREFADIYGIWVKIQKRDLTDALKWAKMYS 220
            ||.:|..:|||..||..|.:|..::.:     .|.::.|.::..|...:.::||..||:||..:.
Human   164 AIVEHLYQQGMLSVAEELCQESTLNVD-----LDFKQPFLELNRILEALHEQDLGPALEWAVSHR 223

  Fly   221 QQLSDRHSLIEFRLHRMRFMQLVSYGLDSQREAISYARLNFKKFAVRYEHEIANLMASFIYLPSG 285
            |:|.:.:|.:||:|||:.|::|::.|...|.||:|||| :|:.||..::.||..:|.|.:||..|
Human   224 QRLLELNSSLEFKLHRLHFIRLLAGGPAKQLEALSYAR-HFQPFARLHQREIQVMMGSLVYLRLG 287

  Fly   286 LENSPYKHFLGQEKWTELSFIFLKDACQLLGISKNSALSVVVNAGCTALPALLNIKQVMQSRQVL 350
            ||.|||.|.|....|.|:...|.:|||.|||:|..|.|||...:||.|||.|:|||.|::.||..
Human   288 LEKSPYCHLLDSSHWAEICETFTRDACSLLGLSVESPLSVSFASGCVALPVLMNIKAVIEQRQCT 352

  Fly   351 GMWNGCDELPIEIDLQPEFRFHSIFACPILRQQTSEDNPPKKLTCGHVISNDALHKLSVGHILKC 415
            |:||..|||||||:|..:..:||:|||||||||||:.|||.||.||||||.|||:||..|..|||
Human   353 GVWNHKDELPIEIELGMKCWYHSVFACPILRQQTSDSNPPIKLICGHVISRDALNKLINGGKLKC 417

  Fly   416 PYCPVEQNAEEAVRIYF 432
            ||||:|||..:..||.|
Human   418 PYCPMEQNPADGKRIIF 434

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3295NP_611536.1 COG5109 88..432 CDD:227440 155/390 (40%)
LisH 152..181 CDD:128913 11/28 (39%)
CTLH 193..250 CDD:128914 19/56 (34%)
CRA 252..343 CDD:214806 46/90 (51%)
zf-RING_UBOX 377..416 CDD:290181 28/38 (74%)
RMND5BXP_024301936.1 COG5109 <137..434 CDD:227440 139/303 (46%)
CLTH 196..340 CDD:371161 62/144 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165147969
Domainoid 1 1.000 127 1.000 Domainoid score I5375
eggNOG 1 0.900 - - E1_COG5109
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 313 1.000 Inparanoid score I2577
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG55101
OrthoDB 1 1.010 - - D576638at33208
OrthoFinder 1 1.000 - - FOG0002102
OrthoInspector 1 1.000 - - otm41683
orthoMCL 1 0.900 - - OOG6_102297
Panther 1 1.100 - - LDO PTHR12170
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1719
SonicParanoid 1 1.000 - - X1554
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1615.800

Return to query results.
Submit another query.