DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9346 and SPBC11C11.01

DIOPT Version :9

Sequence 1:NP_611535.1 Gene:CG9346 / 37381 FlyBaseID:FBgn0034572 Length:957 Species:Drosophila melanogaster
Sequence 2:NP_596390.2 Gene:SPBC11C11.01 / 2539748 PomBaseID:SPBC11C11.01 Length:466 Species:Schizosaccharomyces pombe


Alignment Length:718 Identity:120/718 - (16%)
Similarity:213/718 - (29%) Gaps:302/718 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 NKSKDSAAASATLKRISEKKLEAFTVGTFSKRQLSKKELEDQKKKEDAAAAAHAFKEFVETFQDA 70
            |..:.:...|...|..:.||..  .:||  :|..::||:|.....||....|...|::::.    
pombe     4 NNERVNTNPSLISKSYNMKKRP--VIGT--RRHFARKEIESDSDDEDDIFLAGERKKYLQN---- 60

  Fly    71 PTPSSKVWVKAGTYDAGSRREDKSEKGKLYKPVSKLMEKSSSDKVEDYAKTLASDLKKDSGPLKK 135
                       .:|:   ||:.|:|.|                                      
pombe    61 -----------QSYE---RRKQKNEHG-------------------------------------- 73

  Fly   136 KNQEKKKSNLELFKEELRQIQEEREERHKYKHMASSHSAPAQQPAASAAPVPSSSVSTTSQNSSS 200
                   :||.|.:|.||....|:.|                              ...::|   
pombe    74 -------NNLTLQEELLRHEAYEKNE------------------------------EIANEN--- 98

  Fly   201 SKESGSFDTGDPNTTNL-----YLGNLNPKISEQQLMEIFGRYGPLASIKIMWPRSEEEKQRGRN 260
                      |.:..||     ::.|::|..:...|.|...:|..:.::.|.....:.:|     
pombe    99 ----------DVDQVNLMKYFVHMDNISPVTTNGSLKESLRKYSSIIAVNIFSETGDLKK----- 148

  Fly   261 CGFVAYMSRKDAERALKTLNGRYIMGYEMRLGWGKTVPIMNTPIFTPQALLEMTLPPPPSGLPFN 325
             |...:....|||:|::.|:...|.|                      .|:..|:...|..|| |
pombe   149 -GIAIFQDLSDAEQAVQYLSNCKIDG----------------------RLISATITNHPKRLP-N 189

  Fly   326 AQPPPSEADVLPKKNYKEFNQEDKENMERILAKCVVKVHIPTEKAVLNVIHRMIEFVIREGPMFE 390
            |:...|..     |...|...:||                                         
pombe   190 AEHLESST-----KTKDESQDKDK----------------------------------------- 208

  Fly   391 ALIMIREMENPLFAFLFDNESPAHIYYRWKLFSLLQGDTPNEWREEEFRMFKNGPVWKPPIANFY 455
                                                                             
pombe   209 ----------------------------------------------------------------- 208

  Fly   456 TQGMPDELVVDPDAPVVHKGALSNAQRNRLEDLIRHLTPERARIGDAMIFCIEHADAADEICECI 520
                                 |:...|.:||.||:.|..|:..||:.:.|.:||.:...||.:..
pombe   209 ---------------------LTKLDRAKLEWLIQGLNCEKGSIGNLLCFAVEHVNNHVEITDAF 252

  Fly   521 AESLSN--------------INTLASKKIARLYLISDILHNCTVKVANASFFRKSVEKQLLDIFD 571
            .:...|              ||....||::.:||::|||.|.....:....:|.|.|..:..:.|
pombe   253 LKEFFNDQPTDDTKVYDDDYINERGEKKLSLIYLMNDILFNGISGTSLVWRYRFSFEPHVERLLD 317

  Fly   572 NLHNYYLNIESRLKAEGFKSRVCNVIRTWEEWTIYPKDFMAQLTAKFLGK-PYVKPVNNSPQAEE 635
            :|:.:...:..|:|.:.|..:|..||..|:.|..:.::.:.:....|.|. |....:|::....|
pombe   318 DLYLFSKRLGGRIKEDIFCKKVVKVIEVWKTWIAFQEETLERAWRNFSGNTPQSPQINSAALKVE 382

  Fly   636 TRFD-EALDEDIDGAPLSGEEKDDEDLDGVPLDGAALLKSALKRAIP----DADAGTPKRDTPKK 695
            |:.. .|:.|:.:|.      :|||:.:|:|:|...||.......||    .:.:.:|:....:|
pombe   383 TKNSWTAISEETEGL------QDDEEYNGIPVDVNELLNVEFISQIPMSTETSSSSSPQPTEERK 441

  Fly   696 DEY 698
            .::
pombe   442 AKF 444

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9346NP_611535.1 RRM_SR140 214..297 CDD:240669 17/87 (20%)
Surp 373..423 CDD:280053 0/49 (0%)
RPR 480..619 CDD:214731 38/152 (25%)
cwf21 784..827 CDD:285507
SPBC11C11.01NP_596390.2 RRM_SF 110..178 CDD:240668 16/95 (17%)
VHS_ENTH_ANTH 221..359 CDD:295355 34/137 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 81 1.000 Domainoid score I2326
eggNOG 1 0.900 - - E1_KOG0151
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0004033
OrthoInspector 1 1.000 - - oto100600
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4207
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.840

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