DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9346 and U2SURP

DIOPT Version :10

Sequence 1:NP_611535.1 Gene:CG9346 / 37381 FlyBaseID:FBgn0034572 Length:957 Species:Drosophila melanogaster
Sequence 2:NP_001073884.1 Gene:U2SURP / 23350 HGNCID:30855 Length:1029 Species:Homo sapiens


Alignment Length:1039 Identity:458/1039 - (44%)
Similarity:618/1039 - (59%) Gaps:144/1039 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 KQGNKSKDSAAAS------ATLKR-ISEKKLEAFTVGTFS--KRQLSKKELEDQKKKEDAAAAAH 58
            ::.|...:||..|      ..|.| :.|.||:||::|..|  ||.|||||.|:.|||||..|||.
Human    51 RKHNYRNESARESLCDSPHQNLSRPLLENKLKAFSIGKMSTAKRTLSKKEQEELKKKEDEKAAAE 115

  Fly    59 AFKEFVETFQDAPTPSSKVWVKAGTYDAGSRREDKSEK-GKLYKPVSKLME------KSSSDKVE 116
            .::||:..|:.:.....|.:|:.|..:|.....:..|| ||:|||.|:..:      :||:::. 
Human   116 IYEEFLAAFEGSDGNKVKTFVRGGVVNAAKEEHETDEKRGKIYKPSSRFADQKNPPNQSSNERP- 179

  Fly   117 DYAKTLASDLKKDSGPLKKKNQEKKKSNLELFKEELRQIQEEREERHKYKHMASSHSAPAQQPAA 181
              ...|..:.||.  ||||..:||||||||||||||:||||||:||||.|...|....|......
Human   180 --PSLLVIETKKP--PLKKGEKEKKKSNLELFKEELKQIQEERDERHKTKGRLSRFEPPQSDSDG 240

  Fly   182 SAAPVPSSSVSTTSQNSSSSKESGSFDTGDPNTTNLYLGNLNPKISEQQLMEIFGRYGPLASIKI 246
            ....:.:.|....|.........||.|.|||:||||||||:||:::|:.|.:.|||:|||||:||
Human   241 QRRSMDAPSRRNRSSGVLDDYAPGSHDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGPLASVKI 305

  Fly   247 MWPRSEEEKQRGRNCGFVAYMSRKDAERALKTLNGRYIMGYEMRLGWGKTVPIMNTPIFTPQALL 311
            ||||::||:.|.|||||||:|:|:|||||||.|||:.||.:||:|||||.|||...||:.|.:::
Human   306 MWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLGWGKAVPIPPHPIYIPPSMM 370

  Fly   312 EMTLPPPPSGLPFNAQP-----PPSEADVLPKKNYKEFNQEDKENMERILAKCVVKVHIPTEKAV 371
            |.|||||||||||||||     .|:...:.|.||        ||:.|:.|::.:|||.||||:.:
Human   371 EHTLPPPPSGLPFNAQPRERLKNPNAPMLPPPKN--------KEDFEKTLSQAIVKVVIPTERNL 427

  Fly   372 LNVIHRMIEFVIREGPMFEALIMIREMENPLFAFLFDNESPAHIYYRWKLFSLLQGDTPNEWREE 436
            |.:||||||||:||||||||:||.||:.||:|.|||:|::|||:||||||:|:||||:|.:||.|
Human   428 LALIHRMIEFVVREGPMFEAMIMNREINNPMFRFLFENQTPAHVYYRWKLYSILQGDSPTKWRTE 492

  Fly   437 EFRMFKNGPVWKPPIANFYTQGMPDE-----LVVDPDAPVVHKGALSNAQRNRLEDLIRHLTPER 496
            :|||||||..|:||..|.|..||.:|     .|.:|.    .||||...||::||:::|.|||.:
Human   493 DFRMFKNGSFWRPPPLNPYLHGMSEEQETEAFVEEPS----KKGALKEEQRDKLEEILRGLTPRK 553

  Fly   497 ARIGDAMIFCIEHADAADEICECIAESLSNINTLASKKIARLYLISDILHNCTVKVANASFFRKS 561
            ..|||||:||:.:|:||:||.:||.||||.:.|...||||||||:||:|:|.:.||||||::||.
Human   554 NDIGDAMVFCLNNAEAAEEIVDCITESLSILKTPLPKKIARLYLVSDVLYNSSAKVANASYYRKF 618

  Fly   562 VEKQLLDIFDNLHNYYLNIESRLKAEGFKSRVCNVIRTWEEWTIYPKDFMAQLTAKFLGKPYVKP 626
            .|.:|..||.:|:..|..|:..|::|.||.||....|.||:|.|||:.|:.:|...|||      
Human   619 FETKLCQIFSDLNATYRTIQGHLQSENFKQRVMTCFRAWEDWAIYPEPFLIKLQNIFLG------ 677

  Fly   627 VNNSPQAEETRFDEALDEDIDGAPLSGEEKDDEDLDGVPLDGAALLKSALKRAIPDADAGTPKRD 691
            :.|..:.:||   |.:.:|:||||:      :|:|||.||:              |.| |.|...
Human   678 LVNIIEEKET---EDVPDDLDGAPI------EEELDGAPLE--------------DVD-GIPIDA 718

  Fly   692 TPKKDEYLDEIDGIP---LDDDLDGVPLEKETKSTAKLPGF--IPSKWETVDPQQVEAQAITTSK 751
            ||     :|::||:|   ||||||||||:....|....|.|  .|||||.||..::||||:||||
Human   719 TP-----IDDLDGVPIKSLDDDLDGVPLDATEDSKKNEPIFKVAPSKWEAVDESELEAQAVTTSK 778

  Fly   752 WDTLDPPD--PPKFFSSDDDSGED----------------NP----------QKY---TDEMRQK 785
            |:..|..:  ..:...:.::..||                ||          .||   ::|.|.|
Human   779 WELFDQHEESEEEENQNQEEESEDEEDTQSSKSEEHHLYSNPIKEEMTESKFSKYSEMSEEKRAK 843

  Fly   786 LRDIESKAIQYQDELESGKRRLEPGWSVPEQVEQFRKRLL--------------------KQDSR 830
            ||:||.|.:::|||||||||..:||.|..||||.:|.:||                    |.:||
Human   844 LREIELKVMKFQDELESGKRPKKPGQSFQEQVEHYRDKLLQREKEKELERERERDKKDKEKLESR 908

  Fly   831 SEATVDSPLSYMHIKSKSSKVSESPALFRSSSRKRSHSPFSGGESKRRDYSPETSRSSKSSKRNR 895
            |:...:........|.:..:.|.||:..||||.:|..||     |.:.:.|..:.||.|.|.|:|
Human   909 SKDKKEKDECTPTRKERKRRHSTSPSPSRSSSGRRVKSP-----SPKSERSERSERSHKESSRSR 968

  Fly   896 SRSPSSSPKRYTERSSRS-SRYETP-ASGSSRSRSSPTSSRSSRREEPSPPRHRSDKHKHKHRH 957
            | |...||:..::::.|| |...|| .|..|||||...|.:.||.:..||  |||.|...|::|
Human   969 S-SHKDSPRDVSKKAKRSPSGSRTPKRSRRSRSRSPKKSGKKSRSQSRSP--HRSHKKSKKNKH 1029

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9346NP_611535.1 RRM_SR140 214..297 CDD:409670 57/82 (70%)
Surp 373..423 CDD:460339 36/49 (73%)
RPR 480..619 CDD:214731 69/138 (50%)
cwf21_SR140 778..827 CDD:410597 28/71 (39%)
U2SURPNP_001073884.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..111 26/59 (44%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 141..274 53/137 (39%)
RRM_SR140 273..356 CDD:409670 57/82 (70%)
Surp 429..480 CDD:460339 36/50 (72%)
SURP motif 430..473 30/42 (71%)
RPR 541..676 CDD:214731 67/134 (50%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 778..841 10/62 (16%)
cwf21_SR140 836..884 CDD:410597 26/47 (55%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 855..1029 67/181 (37%)

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