DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9346 and sap-140

DIOPT Version :9

Sequence 1:NP_611535.1 Gene:CG9346 / 37381 FlyBaseID:FBgn0034572 Length:957 Species:Drosophila melanogaster
Sequence 2:NP_498648.1 Gene:sap-140 / 176063 WormBaseID:WBGene00015581 Length:933 Species:Caenorhabditis elegans


Alignment Length:1015 Identity:306/1015 - (30%)
Similarity:464/1015 - (45%) Gaps:219/1015 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 FSKRQLSKKELEDQKKKEDAAAAAHAFKEFVETFQDAPTPSS--KVW----------VKAG---- 82
            :||::  ||..:|::.|.:     .|..||...|..:.:.||  |.:          :.||    
 Worm     5 WSKKR--KKTSDDEEAKLN-----DALLEFQADFGQSSSVSSQPKTFLRGNVVEGNKISAGDGGI 62

  Fly    83 ------------TYDAGSRREDKSEKGKLYKPVSKLMEKSSSDKVEDYAKTLASDLKKDSGPLK- 134
                        |.:.||:..|:::|....|....|.:.:.|.|:.:..|.:....:....|.| 
 Worm    63 YAPKFSMNIPSKTSNVGSKDFDEAKKLAAAKARRMLEDVARSKKMTEVPKVVVPTTRPFQRPPKP 127

  Fly   135 ---KKNQEKKK-SNLELFKEELRQIQEEREERHKYKHMASSHSAPAQQPAASAAPVPSSSVSTTS 195
               |..|:|.| |.:|:||.||:::||:||:|...:|........ |......||........||
 Worm   128 GSSKAKQDKPKISQMEMFKMELQRVQEDREKRKDLRHHLEKVGMD-QAVVERLAPTVERGFQGTS 191

  Fly   196 QNSSSSKESGSFDTGDPNTTNLYLGNLNPKISEQQLMEIFGRYGPLASIKIMWPRSEEEKQRGRN 260
            :          || .||.|||:|:.|:...::|..|:..||.:||||::||::||||||::|...
 Worm   192 E----------FD-DDPYTTNVYVSNIPHSVTEDDLLFTFGSFGPLAALKILYPRSEEERRRPHI 245

  Fly   261 CGFVAYMSRKDAERALKTLNGRYIMGYEMRLGWGKTVPIMNTPIFTPQALLEMTLPPPPSGLPFN 325
            |.|||:|||.|.:|.:..:....:....:|..:.:.|.|...|.:.|..|..:..|.|.|.||||
 Worm   246 CAFVAFMSRADVDRFMAEVRVIIVRNEPIRFAFARPVQIPAIPYYIPPVLHALQHPDPTSNLPFN 310

  Fly   326 AQPPPSEADVLPKKNYKEFN------------QEDKENMERILAKCVVKVHIPTEKAVLNVIHRM 378
            |||..::|    ||..:::|            |...|:...::....::|.:|.::.::.|:.||
 Worm   311 AQPDCADA----KKFLEKYNTFPPMHALPTKGQYGYEDFTELIRNSQIRVVVPPDRKLVRVMDRM 371

  Fly   379 IEFVIREGPMFEALIMIREMENPLFAFLFDNESPAHIYYRWKLFSLLQGDTPNEWREEEFRMFKN 443
            ..:|:.|||.|||:|...|.:||:|.||:||.|..|:||||:::|||||||..|||...||||:|
 Worm   372 AVYVVTEGPQFEAMICAEEFQNPMFQFLWDNTSALHVYYRWRIYSLLQGDTIEEWRRTPFRMFEN 436

  Fly   444 GPVWKPPI-ANFYTQGMPDELV------VDPDAPV-VHKGA------------------------ 476
            |..|.||. .|.....||.||.      ..||..: |..|.                        
 Worm   437 GSWWIPPYPINELRDAMPKELYHMNCLRTYPDKWMKVRDGGQRRGGESSKNRRNSDAEKEERKMR 501

  Fly   477 --------------------LSNAQRNRLEDLIRHLTPERARIGDAMIFCIEHADAADEICECIA 521
                                :|:.:|::||.|||.||||:..|...|::||::|..|.|||||:.
 Worm   502 REEEKERKRREKNEKKRNNRMSDKRRDKLETLIRELTPEKTSIAATMVWCIQNAKYAAEICECVY 566

  Fly   522 ESLSNINTLASKKIARLYLISDILHNCTVK-VANASFFRKSVEKQLLDIFDNLHNYYLNIESRLK 585
            :||:..:....|||:|||||:|||.||..: |.:...:|...|..|..||..:...|..|.||:|
 Worm   567 DSLTIEDIPLYKKISRLYLINDILSNCVQRNVRDVFLYRSHFEALLEKIFVAVGKAYRAIPSRIK 631

  Fly   586 AEGFKSRVCNVIRTWEEWTIYPKDFMAQLTAKFLGKPYVKPVNNSPQAEETRFDEALDEDIDGAP 650
            .|.||.||..|.|.:||..:||.|.:......|||.     :....:..|.|.::.|:       
 Worm   632 QEQFKQRVMCVFRNFEEMAVYPTDKLIHNQNVFLGL-----IEIGKEKSEERDNQKLE------- 684

  Fly   651 LSGEEKDDEDLDGVPLDGAALLKSALKRAIPDADAGTPKRDTPKKDEYLDEIDGIPLDDDLDGVP 715
               ||:|:||||||||:                    .::.....:|.|.:      ||.:||:|
 Worm   685 ---EEEDEEDLDGVPLE--------------------EEKSVQNMNESLYD------DDGIDGIP 720

  Fly   716 LEKETK------STAKLPGFIPSKWETVDPQQVEAQAITTSKWD-------TLDPPDPPKFFSSD 767
            |.:|.|      |||       ||::.|:.::.:...|.:||||       ..:..|......:|
 Worm   721 LHEEVKPSTSTYSTA-------SKFKPVESRKRDGSPIFSSKWDHDGRKSNEEEDEDIDGVMITD 778

  Fly   768 DDSGE-------------DNPQKYT-----DEMRQKL-RDIESKAIQYQDELESGKRRLEPGWSV 813
            |.:.|             |....:|     ||.|:|| ||:|.:||...|:||:.:   :|  ..
 Worm   779 DTTSENLQRDSLSPGEIKDKESSFTVLTPSDEKRRKLIRDVEVRAIAMLDDLEADR---DP--DA 838

  Fly   814 PEQVEQFRKRLLKQDSRSEATVDSPLSYMHIKSKSSKVSESPALFRSSSRKRSHSPFSGGESKRR 878
            ..:|::||:..:::..::..:.:|..|    ..||.:.||.....|...||||       .|:.|
 Worm   839 KRKVDEFRRCEMEKVEKALRSGESKKS----DEKSERKSEKKEKKRDKERKRS-------RSRSR 892

  Fly   879 DYSPETSRSSKSSKRNRSRS-PSSSPKRYTERS-SRSSRY 916
            |...:.||..:|..|:|.|. .....:|..:|. .|..||
 Worm   893 DRDRDRSRRDRSRDRSRDRDRDRDRDRRDRDRDRDRDRRY 932

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9346NP_611535.1 RRM_SR140 214..297 CDD:240669 32/82 (39%)
Surp 373..423 CDD:280053 25/49 (51%)
RPR 480..619 CDD:214731 59/139 (42%)
cwf21 784..827 CDD:285507 14/43 (33%)
sap-140NP_498648.1 RRM_SR140 199..282 CDD:240669 32/82 (39%)
Surp 366..416 CDD:280053 25/49 (51%)
VHS_ENTH_ANTH 529..665 CDD:295355 58/135 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160157343
Domainoid 1 1.000 148 1.000 Domainoid score I2766
eggNOG 1 0.900 - - E1_KOG0151
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H13964
Inparanoid 1 1.050 364 1.000 Inparanoid score I1262
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG46489
OrthoDB 1 1.010 - - D280924at33208
OrthoFinder 1 1.000 - - FOG0004033
OrthoInspector 1 1.000 - - oto17410
orthoMCL 1 0.900 - - OOG6_102628
Panther 1 1.100 - - LDO PTHR23140
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4207
SonicParanoid 1 1.000 - - X3308
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1615.800

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