DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10543 and Zfat

DIOPT Version :10

Sequence 1:NP_001369100.1 Gene:CG10543 / 37379 FlyBaseID:FBgn0034570 Length:1666 Species:Drosophila melanogaster
Sequence 2:XP_006241775.1 Gene:Zfat / 362925 RGDID:1310886 Length:1235 Species:Rattus norvegicus


Alignment Length:1354 Identity:260/1354 - (19%)
Similarity:426/1354 - (31%) Gaps:414/1354 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 LNLLDSLNTALRCDAIQFLLQTLK-------CKYPESCDQVVRNLFSHIAAANDNGESGGRAQQH 75
            ||..::.|.:...|  :||:...|       .|.|.:.::||.||.|.|.......|.|.|....
  Rat    52 LNTPENPNPSKGGD--EFLVMKRKRGRPKGSTKKPSTEEEVVENLVSPIEDGPLAPEEGSRLAPS 114

  Fly    76 ELARTKQLQLLLTAKKEKKE-----LGIGCEAEIKRENDEEEAGSTDLNQNFEKIPCKEEFLCLE 135
            .|..:|..:.....::.:|.     |.:|.|.:...|:|      .||.:.::           |
  Rat   115 SLECSKCCRKFSNTRQLRKHICIIVLNLGEEGDAGNESD------LDLEKTYK-----------E 162

  Fly   136 EEEEDFLDDADTQNSSSLQFHTGNNVDALALGPGDPL--------ELIQSGVSL----------- 181
            ::.|........|.:..:|..:|.....|: |...|:        |.|.....:           
  Rat   163 DDREKTSKRPRAQKTEKVQKISGKEAGQLS-GAKKPIISVVLTAHEAIPGATKIIPVEAGPPETG 226

  Fly   182 ----------LVKRKYAATFDDELIGDGDGDEANSNSSDG-------------KMVKRKRTNNMH 223
                      ||.|:   .:.:..|.....::...:|..|             |:.|.|.:...|
  Rat   227 APPPETTAADLVPRR---GYQEYAIQQTPYEQPMKSSRLGPTQLKIFTCEYCNKVFKFKHSLQAH 288

  Fly   224 LTVSSVRRKEEHGQLGDGYVFHEDSQYTMRYHHSTGE---FSERAFKAQFRALLRLALSQHHKP- 284
            |.:.:..:..:..|.........:....:|.|  |||   ....:|....:..|::.:.:.||. 
  Rat   289 LRIHTNEKPYKCSQCSYASAIKANLNVHLRKH--TGEKFACDYCSFTCLSKGHLKVHIERVHKKI 351

  Fly   285 -----FLRQFY---ENFVVNGRLLGTTPSMRVLKELREQRLEEWRRQRE-RRQLVILMEQSETQR 340
                 |.::.|   :|.:.:.|.:......:|.:.|.|.||    ..|| :|||:......|.:.
  Rat   352 KQHCRFCKKKYSDVKNLIKHIRDMHDPQDKKVKEALDELRL----MTREGKRQLLYDCHICERKF 412

  Fly   341 DEEFQQQQELVENQE------EVQQEQEQQQQQLE---------------------DIQ-QQHLE 377
            ..|..:.:.::.:.:      |:......:.|.||                     .|: :.|:.
  Rat   413 KNELDRDRHMLVHGDKWPFACELCGHGATKYQALELHVRKHPFVYVCAICLKKFVSSIRLRSHIR 477

  Fly   378 EIQRQQQLPAI-------SF------GDSELESETESQLSSAAQEIMKFEEFIDEGVGAGRLIDG 429
            |:....|...:       ||      ||.:.|: ..:||..||:|.:..|  ||  |..|.:..|
  Rat   478 EVHGAAQETLVFTSSINQSFCLLEPGGDIQQEA-LGNQLPLAAEEFVCPE--ID--VRKGEVCPG 537

  Fly   430 LEMEPEIDDMLAGAGSMNSASGHSSNSSSSGSGSAGNGNGISGVILENNSHHTHHLSSSSSANLV 494
             |.:||:     |...:          .:.|...|      ..|.|.|....:..||.......|
  Rat   538 -EAQPEV-----GLREL----------EAPGEACA------PAVPLANPQSVSVSLSPCKLETTV 580

  Fly   495 ING-LTSSNSISNNNNNSNNVSLHRP----QLTPQAQNQLAASMKPSDHIPISMPMENMDLKAGQ 554
            :|. |.|...:|::.....:.|...|    :||...|::                          
  Rat   581 VNSDLNSLGVVSDDFLLKTDTSSAEPHAAAELTSDTQHR-------------------------- 619

  Fly   555 AAHGTANAIMQGGSSSLASQLHQQQKPYNSSNNPLSMMGGMMQQQQQQHVAMPHHQRQMMMMPED 619
               |:|..  ||...:|.....:...|  .|.:|.|  ||                         
  Rat   620 ---GSAQT--QGEEVTLLLAKAKSTGP--DSESPPS--GG------------------------- 650

  Fly   620 FPQHGASMMNSRQMPALAALSNLGDTPAMSGQLNSSLELDDNDLSADEDDDDLDHDLDELDAAKQ 684
                                .|:|..||.....|..|..:..:.|          ||      ..
  Rat   651 --------------------QNVGALPASESDSNRCLRANPAETS----------DL------LP 679

  Fly   685 QLIDGGS------SSSTSLQAPPSQHGSGSGGSGGQTPGSK----KDKPSYNCLLCPKSYRKRKS 739
            .:.|||.      .|.||    .|:|..||      |...|    ..|...|..||.   |.||.
  Rat   680 TVADGGDLGVCQPDSCTS----SSEHHPGS------TAFMKVLDSLQKKQMNTSLCE---RIRKV 731

  Fly   740 LLD--------------HYKMHPG--------YCHDC--GQRNGNTLE-EIIHHNRTMHVKEFPF 779
            ..|              |:.||..        ||..|  .....|.|: .:|..:..:.:|    
  Rat   732 YGDLECEYCGKLFWYQVHFDMHVRTHTREHLYYCSQCHYSSITKNCLKRHVIQKHSNILLK---- 792

  Fly   780 VCETCGESYSR--KQQFHAHVESHNKKEIKTFPCGECGLKFPQKKLQQHFEETGHK--ADGAICE 840
             |.|.|..||.  |.:..||::.|.:.:.:::.|..|...|.:.:|.:...:|.|.  :...|.|
  Rat   793 -CPTDGCDYSTPDKYKLQAHLKVHTELDKRSYSCPVCEKSFSEDRLIKSHIKTNHPEVSMNTISE 856

  Fly   841 VCGEEFQSKNAL--------------------YQHIIRVHKRDNFFECHICHNRFTLKANLERHV 885
            |.|...|.|..:                    .|..|..|:....|:|.:|......|:||:.|:
  Rat   857 VLGRRVQLKGLIGKRAMKCPYCDFYFMKNGSDLQRHIWAHEGVKPFKCSLCEYATRSKSNLKAHM 921

  Fly   886 QLHTEIKRPYVCDLCGSSYFTYPALKEHYSNAHVDVSECKCTLCGKRFGSAKSLQRHLPSHSEER 950
            ..|: .::.::||:||..:.:...||.|......|..:.|||:|.........|.||:..|:..:
  Rat   922 NRHS-TEKTHLCDMCGKKFKSKGTLKSHKLLHTSDGKQFKCTVCDYTAAQKPQLLRHMEQHASFK 985

  Fly   951 PHCCNYCDQTFKWKTHLVRHKQTMHGNEPPPP------------KKG-------------KQRFP 990
            |..|.:|..:......|.||....|.||....            ::|             |..|.
  Rat   986 PFRCAHCHYSCNISGSLKRHYNRKHPNEEYANVGSGELAAEALIQQGGLKCPVCSFVYGTKWEFN 1050

  Fly   991 KTSEEDMG-SLPDMPGPP--------PVKASKK--AATSKAKAQAAAAAAAAASS-QQQQQKGSA 1043
            :..:...| .:.::.|.|        |.:.|.:  ..|.....|...||.||... :...:.|..
  Rat  1051 RHLKNKHGLKVVEIDGDPKWEPATETPEEPSTQYLYITEAEDVQGTQAAVAALQDLRYTSESGDR 1115

  Fly  1044 ATPT---------------------------PPPPVSTTPGCLQQDP--FNAAMVSSNSSQSSTA 1079
            ..||                           .|..|:.......::|  .:..|:.....|:|..
  Rat  1116 LDPTAVNILQQIIELGSETHDAAAVASVVAMAPGTVTVVKQVTDEEPNSNHTVMIQETLQQASVE 1180

  Fly  1080 STSQHSVSTSES-----QQNSIYNQSFNAEKQQPGQQQPQNTLHQQHPTPPPPQ 1128
            ...||.:..|..     :..::|.|...|.:.....|:....:.:|....|.|:
  Rat  1181 LAEQHHLVVSSDDVEGIETVTVYTQGGEASEFIVYVQEAVQPMEEQVGEQPAPE 1234

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10543NP_001369100.1 C2H2 Zn finger 727..747 CDD:275368 7/33 (21%)
C2H2 Zn finger 751..773 CDD:275368 5/24 (21%)
C2H2 Zn finger 781..801 CDD:275368 8/21 (38%)
PHA00733 <804..860 CDD:177301 14/77 (18%)
C2H2 Zn finger 811..827 CDD:275368 4/15 (27%)
C2H2 Zn finger 839..860 CDD:275368 7/40 (18%)
C2H2 Zn finger 868..888 CDD:275368 6/19 (32%)
C2H2 Zn finger 897..913 CDD:275368 6/15 (40%)
C2H2 Zn finger 926..946 CDD:275368 6/19 (32%)
KREPA <944..>1009 CDD:483960 16/98 (16%)
C2H2 Zn finger 954..975 CDD:275368 5/20 (25%)
ZfatXP_006241775.1 zf-C2H2 270..292 CDD:395048 5/21 (24%)
C2H2 Zn finger 272..292 CDD:275368 5/19 (26%)
zf-H2C2_2 284..308 CDD:463886 3/23 (13%)
zf-H2C2_5 298..322 CDD:404746 3/25 (12%)
C2H2 Zn finger 300..320 CDD:275368 2/19 (11%)
C2H2 Zn finger 327..348 CDD:275368 2/20 (10%)
C2H2 Zn finger 355..395 CDD:275368 9/43 (21%)
C2H2 Zn finger 405..425 CDD:275368 2/19 (11%)
C2H2 Zn finger 433..453 CDD:275368 4/19 (21%)
C2H2 Zn finger 459..477 CDD:275368 2/17 (12%)
C2H2 Zn finger 737..757 CDD:275368 3/19 (16%)
C2H2 Zn finger 765..815 CDD:275368 14/54 (26%)
C2H2 Zn finger 825..844 CDD:275368 4/18 (22%)
C2H2 Zn finger 875..896 CDD:275368 2/20 (10%)
C2H2 Zn finger 904..924 CDD:275368 6/19 (32%)
C2H2 Zn finger 932..952 CDD:275368 7/19 (37%)
zf-H2C2_5 959..981 CDD:404746 7/21 (33%)
C2H2 Zn finger 961..981 CDD:275368 6/19 (32%)
C2H2 Zn finger 989..1010 CDD:275368 5/20 (25%)
C2H2 Zn finger 1036..1054 CDD:275368 2/17 (12%)

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