DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10543 and wor

DIOPT Version :10

Sequence 1:NP_001369100.1 Gene:CG10543 / 37379 FlyBaseID:FBgn0034570 Length:1666 Species:Drosophila melanogaster
Sequence 2:NP_476601.1 Gene:wor / 34906 FlyBaseID:FBgn0001983 Length:548 Species:Drosophila melanogaster


Alignment Length:467 Identity:97/467 - (20%)
Similarity:149/467 - (31%) Gaps:172/467 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   504 ISNNNNNSNNVS---LHRPQLTPQAQNQLAASMKPSDHIPISMPM----ENMDLKAGQAAHGTAN 561
            :.:.|.|..||:   |....:.||             |.|..:.|    ||.|:          |
  Fly   215 VLSENMNLQNVARALLSMQHMAPQ-------------HAPPPIDMEEDQENQDI----------N 256

  Fly   562 AIMQGGSSSLASQLHQQQKPYNSSNNPLSMMGGMMQQQQQQHVAMPHHQRQMMMMPEDFPQHGAS 626
            .:....|:.|..|..|..|.|       :...|:::.||........::                
  Fly   257 QLKIKSSNDLYYQCQQCNKCY-------ATYAGLVKHQQTHAYESTEYK---------------- 298

  Fly   627 MMNSRQMPALAALSNLGDTPAMSGQLNSSLELDDNDLSADEDDDDLDHDLDELDAAKQQLIDGGS 691
            ::.|:              |..||.:....|...:..||                    ||...:
  Fly   299 IIRSQ--------------PGGSGAIVDQTEFCTDQASA--------------------LIQAAN 329

  Fly   692 -SSSTSLQAPPSQHGSGSGGSGGQTPGSKKDKPSYNCLLCPKSYRKRKSLLDHYKMHPGYCHDCG 755
             :|:.|:|.|..                   .|.|:|..|.|||.....|..|.:.|      |.
  Fly   330 VASAQSMQKPVG-------------------VPRYHCQDCGKSYSTYSGLSKHQQFH------CP 369

  Fly   756 QRNGNTLEEIIHHNRTMHVKEFPFVCETCGESYSRKQQFHAHVESHNKKEIKTFPCGECGLKFPQ 820
            ...||.::::             |.|:.|.::|........|:.:|      |.||.        
  Fly   370 SAEGNQVKKV-------------FSCKNCDKTYVSLGALKMHIRTH------TLPCK-------- 407

  Fly   821 KKLQQHFEETGHKADGAICEVCGEEFQSKNALYQHIIRVHKRDNFFECHICHNRFTLKANLERHV 885
                              |.:||:.| |:..|.|..||.|..:..|.|..|:..|..::||..|:
  Fly   408 ------------------CPICGKAF-SRPWLLQGHIRTHTGEKPFSCQHCNRAFADRSNLRAHM 453

  Fly   886 QLHTEIKRPYVCDLCGSSYFTYPALKEHYSNAHVDVSECKCTLCGKRFGSA-----KSLQRHLPS 945
            |.|:::|: |.|..|..|:.....|.:|..      |.|:....|...||.     :.||:||..
  Fly   454 QTHSDVKK-YSCPTCTKSFSRMSLLAKHLQ------SGCQTEQSGGPSGSGGGFDQQQLQQHLQV 511

  Fly   946 HSE-ERPHCCNY 956
            :.| ..||...|
  Fly   512 YEEGHNPHQLYY 523

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10543NP_001369100.1 C2H2 Zn finger 727..747 CDD:275368 7/19 (37%)
C2H2 Zn finger 751..773 CDD:275368 3/21 (14%)
C2H2 Zn finger 781..801 CDD:275368 4/19 (21%)
PHA00733 <804..860 CDD:177301 12/55 (22%)
C2H2 Zn finger 811..827 CDD:275368 1/15 (7%)
C2H2 Zn finger 839..860 CDD:275368 9/20 (45%)
C2H2 Zn finger 868..888 CDD:275368 7/19 (37%)
C2H2 Zn finger 897..913 CDD:275368 4/15 (27%)
C2H2 Zn finger 926..946 CDD:275368 7/24 (29%)
KREPA <944..>1009 CDD:483960 4/14 (29%)
C2H2 Zn finger 954..975 CDD:275368 1/3 (33%)
worNP_476601.1 C2H2 Zn finger 270..290 CDD:275368 6/26 (23%)
C2H2 Zn finger 317..334 CDD:275368 5/36 (14%)
zf-C2H2 345..367 CDD:395048 8/21 (38%)
C2H2 Zn finger 347..367 CDD:275368 7/19 (37%)
zf-C2H2 380..402 CDD:395048 5/21 (24%)
C2H2 Zn finger 382..402 CDD:275368 4/19 (21%)
zf-C2H2 406..428 CDD:395048 10/48 (21%)
C2H2 Zn finger 408..428 CDD:275368 9/20 (45%)
zf-C2H2 434..456 CDD:395048 8/21 (38%)
C2H2 Zn finger 436..456 CDD:275368 7/19 (37%)
C2H2 Zn finger 464..481 CDD:275368 4/16 (25%)

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