DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10543 and zf30C

DIOPT Version :9

Sequence 1:NP_001369100.1 Gene:CG10543 / 37379 FlyBaseID:FBgn0034570 Length:1666 Species:Drosophila melanogaster
Sequence 2:NP_477301.1 Gene:zf30C / 34292 FlyBaseID:FBgn0270924 Length:777 Species:Drosophila melanogaster


Alignment Length:374 Identity:86/374 - (22%)
Similarity:133/374 - (35%) Gaps:95/374 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   718 SKKDKPSYNCLLCPKSYRKRKSLLDHYKMH----------PGYCHDCGQRNGN----TLEEIIHH 768
            :|.|:..:.|.:|.|.|...|.|:.|.|:|          |.||        |    |.|:...|
  Fly   444 AKLDEEVFKCPICSKIYLVEKRLVTHMKVHGEDGKLTFKCPCYC--------NLFFATKEQATEH 500

  Fly   769 NRTMHVKEFPFVCETCGESYSRKQQFHAHVES-HNKKEIKTFPCGECGLKFPQKKLQQHFEETGH 832
            .|..| ||..: ||.|.:..:.......|..: |:|||.::          .|:.|         
  Fly   501 ARAQH-KELLY-CEKCDKYMTGHDSLKNHERNFHSKKEPRS----------QQRNL--------- 544

  Fly   833 KADGAICEVCGEEFQSKNALYQHIIRVHKRDNFFECHICHNRFTLKANLERHVQLHTEIKRPYVC 897
                 ||:.||::|..:.:|..|:.....|...:.|.:|....:....|:.|:.|| :...||.|
  Fly   545 -----ICDKCGKKFTGRTSLSDHVRSDCGRLPLYGCSVCGKHLSTAGILKTHMLLH-KADTPYQC 603

  Fly   898 DLCGSSYFTYPALKEHYSNAHVDVSECKCTLCGKRFGSAKSLQRHLPSHSEERPHCCNYCDQTFK 962
            |.||.::......|.|....|.|....||.||.|.:...:||..|:..|:..:...||.|.:.|.
  Fly   604 DKCGKTFKVKAQYKSHLKTRHTDYKPYKCHLCPKEYPYRESLLTHMTVHTGIKRFLCNNCGKRFT 668

  Fly   963 WKTHLVRHKQTMHGNEPPPPKKGKQRFPKTSEEDMGSLPDMPGPPPVKASKKAATSKAKAQAAAA 1027
            ..::|..|:                   |...:..|.|     |...||::.....:.|....|.
  Fly   669 CISNLQAHR-------------------KVHADTCGQL-----PLNAKATQYMGVQRGKLLMGAK 709

  Fly  1028 AAAAASSQQQQ---------------------QKGSAATPTPPPPVSTT 1055
            ..|....::.:                     ..|||...|.|...::|
  Fly   710 PEAGMEYEETKTLIAQDVIDRDMPMAQELNFPSDGSAPLATVPLNYAST 758

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10543NP_001369100.1 C2H2 Zn finger 727..747 CDD:275368 8/19 (42%)
C2H2 Zn finger 751..773 CDD:275368 6/25 (24%)
C2H2 Zn finger 781..801 CDD:275368 4/20 (20%)
PHA00733 <804..860 CDD:177301 11/55 (20%)
C2H2 Zn finger 811..827 CDD:275368 2/15 (13%)
C2H2 Zn finger 839..860 CDD:275368 6/20 (30%)
C2H2 Zn finger 868..888 CDD:275368 4/19 (21%)
C2H2 Zn finger 897..913 CDD:275368 5/15 (33%)
C2H2 Zn finger 926..946 CDD:275368 7/19 (37%)
C2H2 Zn finger 954..975 CDD:275368 6/20 (30%)
zf30CNP_477301.1 C2H2 Zn finger 33..53 CDD:275368
C2H2 Zn finger 61..82 CDD:275368
C2H2 Zn finger 98..117 CDD:275368
C2H2 Zn finger 134..152 CDD:275368
C2H2 Zn finger 511..532 CDD:275370 4/20 (20%)
COG5048 <523..>672 CDD:227381 44/173 (25%)
C2H2 Zn finger 546..566 CDD:275368 6/19 (32%)
C2H2 Zn finger 575..595 CDD:275368 4/19 (21%)
C2H2 Zn finger 603..624 CDD:275368 6/20 (30%)
C2H2 Zn finger 632..652 CDD:275368 7/19 (37%)
C2H2 Zn finger 660..680 CDD:275368 7/38 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24409
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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