DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10543 and spr-4

DIOPT Version :10

Sequence 1:NP_001369100.1 Gene:CG10543 / 37379 FlyBaseID:FBgn0034570 Length:1666 Species:Drosophila melanogaster
Sequence 2:NP_001020993.1 Gene:spr-4 / 172596 WormBaseID:WBGene00005009 Length:1311 Species:Caenorhabditis elegans


Alignment Length:1281 Identity:211/1281 - (16%)
Similarity:370/1281 - (28%) Gaps:495/1281 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   475 LENNSHHTHHL------SSSSSAN---------------LVINGLTSSNSISNNNNNSNNVSLHR 518
            :||:..|..|.      |.||.||               |.....::..|::::||      :| 
 Worm   106 IENSGPHACHKCPSRYESKSSLANHTKMHLGEKRKFACELCDFSASTLKSLTHHNN------IH- 163

  Fly   519 PQLTPQAQNQLAASMKPSDHIPISMPMENMDLKAGQAAHGTANAIMQGGSSSLASQLHQQQKPYN 583
                   ||....|.:.|..||::               .:|::.:....:|...|::....|..
 Worm   164 -------QNFGVLSQQTSPVIPVA---------------SSADSTLNSSINSTGCQINAPPAPKL 206

  Fly   584 SSNNPLSMMGGMMQQQ-------------QQQHVAMPHHQRQMMMMPEDFP----QHGASMMNSR 631
            ....|:::...::..:             :::....|...|:..:...:.|    |....|...|
 Worm   207 DEEAPIAVESVVVHHEDVAEFDTTPPPILEREDDGPPVLIREAPVRKSNRPMKPTQKAQKMTKQR 271

  Fly   632 QMPALAALSNLGDTPAMSGQLNSSL-------ELDDNDLSADEDDDDLDHDLDELDAAKQQLIDG 689
            :..:....|..|..|:.|.   ||:       :::...:.......:|...: ::...:|:....
 Worm   272 ERKSKTVESPKGSLPSSSA---SSVTPPPVRKDVEKPKIFVKTTKKNLKKTM-KITKVRQRCPHC 332

  Fly   690 GSSSSTSLQAPPSQHGSGSGGSGGQTPGSKKDKPSYNC-LLCPKSYRKRKSLLDHYKMH------ 747
            ..::||..:.  ::|      |||.........||.|| .:|    ||...|..||.:|      
 Worm   333 PFTTSTVTRL--NRH------SGGHKLKEGYICPSENCNFMC----RKAGFLQKHYILHKGTLPW 385

  Fly   748 -PGYCHDCG----------------------------QRNGNTLEE------------------- 764
             |.|....|                            :|..||::.                   
 Worm   386 PPEYVKKGGAKMKRTFPESEEKKIEVTEKVQKMKKMHKRRANTVQVVAKAQLKSYIKVEVDDVIF 450

  Fly   765 ------------------IIHHNRTMHVK-EFP---FVCETCG---ESYS--RKQQFHAHVESHN 802
                              |:|..:|...| .||   |:|.|||   :||:  |..:...|..:| 
 Worm   451 KKCNIGECEFLTQTLTQLIVHKVKTHDTKTAFPQHRFLCLTCGHRAKSYAALRTHKLIEHTSTH- 514

  Fly   803 KKEIKTFPCGEC-GLKFPQK----KLQQHFEETGHKADG-----------------------AI- 838
            |:..:|:...|| |.||..|    |:|:..:|...:|||                       || 
 Worm   515 KRFHRTYYLKECVGDKFFVKYNLSKVQEEVKEEPKEADGDESGDESFDSMCPASDVHPETLAAIE 579

  Fly   839 -------CEVCGEEFQSKNALYQHIIRVHKRDNFFECHIC------------HNRF--------- 875
                   |.:|..:..:.|...:|..:..|.|. |:|..|            |.:.         
 Worm   580 MKDVFFCCNMCPYKAPTMNRCQRHYDKHFKNDE-FKCQYCSWSSRSKEVIVNHEKLHPTVVVANT 643

  Fly   876 ----TLKANLERHVQ-LHTEIKRPYVCD-----------LCGSSYFTYPALKEHYSNAHVD---- 920
                .:|..:|..|: |...:..|..|.           .|......:|.|.|.::...:|    
 Worm   644 NEAPVVKNEIEAKVEVLSKTVSSPVECTEESSLSKSIQLWCQREKLRHPELDEQFTRKMIDGVKG 708

  Fly   921 --VSEC-----------------------KCTLCGKRFGSAKSLQRHLPSHS------------- 947
              .::|                       :|..|........||:.||..|:             
 Worm   709 FQCTDCPYTSKYRGDMRSHKKRHDIEQLYRCVQCTYTTNRPVSLKDHLKQHAIVNMSIADIKSRR 773

  Fly   948 ----------------EERPHCCNYCDQT-----FKWKTHLVRHKQT------------------ 973
                            :::.:||:.|...     ..|:.|. .|:.|                  
 Worm   774 VVVNQGVKIGMRRGVGKDKIYCCDKCPYVTLALGCLWRHHR-NHRDTAKINICSNCSYSSIDQRK 837

  Fly   974 ----------MHGNEPPP-----PKKGKQRFPKTSEEDMGSLPDMPGPPPVKASKKAATSKA--- 1020
                      :..||..|     .:||:   |.:|..|:.|         .|.:::.:|.:.   
 Worm   838 MEEHTIIHLGLGLNEAVPFVKRVDQKGR---PVSSLTDLNS---------EKMNERKSTKRKMLD 890

  Fly  1021 KAQAAAAAAAAASSQQQQQKGSAATPTPPPPVSTTPGCLQQDPFNAAMVSSNSSQSST---ASTS 1082
            |.:...........::...||            |..|..:|.|......||....|..   .|:|
 Worm   891 KVEKMEVGEDEEDDEESVDKG------------TDDGDYKQRPEKKRKQSSEEPASDPELFGSSS 943

  Fly  1083 QHSVSTSESQQNSIYNQSFNAEKQQPGQQQPQNTLHQQHPTPPPPQQQQQQQQQQQALPQSRVGP 1147
            |.:...||....:..|.|. ..|...|:           |||                     ..
 Worm   944 QPTRQLSERATRNRINYSL-LSKNGSGK-----------PTP---------------------ST 975

  Fly  1148 GELHLQRMNSFGQDGQFHFES-NPAAGAYQQHQLISQYQQQQQQQQQQ--------QQQQPQQQQ 1203
            ...:|:::  .|..|....|| .|.......|..|..:.:.:...::.        :..:|...:
 Worm   976 SSANLEKL--AGSSGGASSESPEPDESVEVSHWKIRTFLRSEYGVKESLKCPDCPYKSSEPDVLE 1038

  Fly  1204 QHHLAQQQQQHMRSHTPQSPHPPHPSQLQQQQPQ---QHF---SSPHHMPPMHHQHQLMMQQQHR 1262
            :|     :..||...||: |:...........|.   ||.   |...:..||..:|     .:||
 Worm  1039 KH-----RYYHMTKTTPR-PYACSDCTFNTYTPTALLQHLKLHSEGVYFDPMVKKH-----MKHR 1092

  Fly  1263 HNQRSPLHHHPAAQ---------QLQQQHQQPSHSPQHQHARLQ------SPQPAPVQQQQQQQQ 1312
            .....|    |..:         :.........||..|:...:.      ..||..::.|:.:.:
 Worm  1093 KGDSIP----PGVKGYYCKNCSFKTSIHRNFIEHSAYHRQQLINRINITLKRQPPRIEYQRPKLK 1153

  Fly  1313 QQ---------------QQQQQQFLQQQAADTWGNM----------NFGNPPNNQQVE---LKDN 1349
            .|               ...|..|::......|..:          |..:..:..|:.   :||.
 Worm  1154 HQFVAKNAKYCKKCTFKCVSQSNFIEHLDRHGWNQLYKCYSCDYSDNTKSVVDFHQLNHHIVKDQ 1218

  Fly  1350 KFY-IVESAEFLGLPMNVPPSPQQQQQQAVSKPQQQQQQQHPQPQQ 1394
            ..: |.:||:|            :.:...:..|:.|.::..|.|.:
 Worm  1219 TLHSICQSAKF------------RLENGVIQIPEFQTEKSKPTPDE 1252

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10543NP_001369100.1 C2H2 Zn finger 727..747 CDD:275368 7/20 (35%)
C2H2 Zn finger 751..773 CDD:275368 7/86 (8%)
C2H2 Zn finger 781..801 CDD:275368 8/24 (33%)
PHA00733 <804..860 CDD:177301 19/91 (21%)
C2H2 Zn finger 811..827 CDD:275368 8/20 (40%)
C2H2 Zn finger 839..860 CDD:275368 4/20 (20%)
C2H2 Zn finger 868..888 CDD:275368 6/45 (13%)
C2H2 Zn finger 897..913 CDD:275368 4/26 (15%)
C2H2 Zn finger 926..946 CDD:275368 6/19 (32%)
KREPA <944..>1009 CDD:483960 17/131 (13%)
C2H2 Zn finger 954..975 CDD:275368 6/53 (11%)
spr-4NP_001020993.1 C2H2 Zn finger 114..134 CDD:275368 6/19 (32%)
C2H2 Zn finger 143..163 CDD:275368 4/25 (16%)

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