DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10543 and znf142

DIOPT Version :9

Sequence 1:NP_001369100.1 Gene:CG10543 / 37379 FlyBaseID:FBgn0034570 Length:1666 Species:Drosophila melanogaster
Sequence 2:XP_002934000.3 Gene:znf142 / 100485110 XenbaseID:XB-GENE-1032931 Length:1898 Species:Xenopus tropicalis


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10543NP_001369100.1 C2H2 Zn finger 727..747 CDD:275368
C2H2 Zn finger 751..773 CDD:275368
C2H2 Zn finger 781..801 CDD:275368
PHA00733 <804..860 CDD:177301
C2H2 Zn finger 811..827 CDD:275368
C2H2 Zn finger 839..860 CDD:275368
C2H2 Zn finger 868..888 CDD:275368
C2H2 Zn finger 897..913 CDD:275368
C2H2 Zn finger 926..946 CDD:275368
C2H2 Zn finger 954..975 CDD:275368
znf142XP_002934000.3 C2H2 Zn finger 358..378 CDD:275368
C2H2 Zn finger 386..406 CDD:275368
C2H2 Zn finger 414..431 CDD:275368
C2H2 Zn finger 448..468 CDD:275368
C2H2 Zn finger 534..555 CDD:275368
C2H2 Zn finger 563..584 CDD:275368
C2H2 Zn finger 592..612 CDD:275368
C2H2 Zn finger 620..640 CDD:275368
C2H2 Zn finger 648..668 CDD:275368
C2H2 Zn finger 676..696 CDD:275368
C2H2 Zn finger 703..720 CDD:275368
C2H2 Zn finger 1401..1422 CDD:275368
C2H2 Zn finger 1430..1450 CDD:275368
C2H2 Zn finger 1458..1476 CDD:275368
C2H2 Zn finger 1516..1537 CDD:275368
C2H2 Zn finger 1545..1565 CDD:275368
C2H2 Zn finger 1571..1591 CDD:275368
C2H2 Zn finger 1634..1654 CDD:275368
C2H2 Zn finger 1662..1682 CDD:275368
SFP1 <1684..1739 CDD:227516
C2H2 Zn finger 1690..1710 CDD:275368
C2H2 Zn finger 1718..1738 CDD:275368
C2H2 Zn finger 1746..1767 CDD:275368
C2H2 Zn finger 1775..1795 CDD:275368
C2H2 Zn finger 1803..1823 CDD:275368
C2H2 Zn finger 1831..1851 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24409
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.