DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha3 and PRE8

DIOPT Version :10

Sequence 1:NP_476691.1 Gene:Prosalpha3 / 37378 FlyBaseID:FBgn0261394 Length:264 Species:Drosophila melanogaster
Sequence 2:NP_013618.1 Gene:PRE8 / 854882 SGDID:S000004557 Length:250 Species:Saccharomyces cerevisiae


Alignment Length:237 Identity:87/237 - (36%)
Similarity:127/237 - (53%) Gaps:17/237 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MARRYDSRTTIFSPEGRLYQVEYAMEAISHAGTCLGILAEDGILLAAECRSTNKLLDSAIPSEKI 65
            |..||....|.|||.|:|.|::||:.|:....|.|||.|.:|:::|.|.:|::.|..|...| |:
Yeast     1 MTDRYSFSLTTFSPSGKLGQIDYALTAVKQGVTSLGIKATNGVVIATEKKSSSPLAMSETLS-KV 64

  Fly    66 YRLNDNMVCSVAGITSDANVLTSELRLIAQ-RYQFSYGEVIPCEQLVSHLCDIKQAYTQYGGKRP 129
            ..|..::....:|:..|..||..:.|.:|. .|:..|||..|.:.|||.:..|.|..||.||.||
Yeast    65 SLLTPDIGAVYSGMGPDYRVLVDKSRKVAHTSYKRIYGEYPPTKLLVSEVAKIMQEATQSGGVRP 129

  Fly   130 FGVSLLYMGWDNKYGYQLYQSDPSGNYGGWKATCIGNNFGAAISMLKQELADKENVKLTLADAKD 194
            ||||||..|.|...|:.|||.||||:|..||||.||....||.:.|::    :.|.:|.|.||..
Yeast   130 FGVSLLIAGHDEFNGFSLYQVDPSGSYFPWKATAIGKGSVAAKTFLEK----RWNDELELEDAIH 190

  Fly   195 LAIKVLSMTLDTTKLTPEKVEMATLQRVDNKTVYSVLEKPDV 236
            :|:..|..::: .:...:.:|:|.:..          |.||:
Yeast   191 IALLTLKESVE-GEFNGDTIELAIIGD----------ENPDL 221

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha3NP_476691.1 proteasome_alpha_type_4 3..219 CDD:239721 83/216 (38%)
PRE8NP_013618.1 proteasome_alpha_type_2 5..247 CDD:239719 85/233 (36%)

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