DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha3 and PUP1

DIOPT Version :10

Sequence 1:NP_476691.1 Gene:Prosalpha3 / 37378 FlyBaseID:FBgn0261394 Length:264 Species:Drosophila melanogaster
Sequence 2:NP_014800.3 Gene:PUP1 / 854328 SGDID:S000005683 Length:261 Species:Saccharomyces cerevisiae


Alignment Length:173 Identity:47/173 - (27%)
Similarity:83/173 - (47%) Gaps:15/173 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 EAISHAGTCLGILAEDGILLAAECRSTNKLLDSAIPSEKIYRLNDNMVCSVAGITSDANVLTSEL 90
            :|.|...|.:|:...:|:::||:.|||...:.:.....|::|::..:.|:.||..:|...:|   
Yeast    24 KATSTGTTIVGVKFNNGVVIAADTRSTQGPIVADKNCAKLHRISPKIWCAGAGTAADTEAVT--- 85

  Fly    91 RLIAQRYQFS--YGEVIPCEQLVSHLCDIKQAYTQYGGKRPFGVSLLYMGWDNKYGYQLYQSDPS 153
            :||....:..  |....|  ::||.|..:||...:|.|.  .|..|:..|.| ..|..|:.....
Yeast    86 QLIGSNIELHSLYTSREP--RVVSALQMLKQHLFKYQGH--IGAYLIVAGVD-PTGSHLFSIHAH 145

  Fly   154 GNYGGWKATCIGNNFGAAISML----KQELADKENVKLTLADA 192
            |:........:|:...||:::|    ||:|..:|.:||. :||
Yeast   146 GSTDVGYYLSLGSGSLAAMAVLESHWKQDLTKEEAIKLA-SDA 187

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha3NP_476691.1 proteasome_alpha_type_4 3..219 CDD:239721 47/173 (27%)
PUP1NP_014800.3 proteasome_beta_type_7 30..219 CDD:239732 45/167 (27%)
Pr_beta_C 222..257 CDD:463597
Blue background indicates that the domain is not in the aligned region.

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