DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha3 and PUP1

DIOPT Version :9

Sequence 1:NP_476691.1 Gene:Prosalpha3 / 37378 FlyBaseID:FBgn0261394 Length:264 Species:Drosophila melanogaster
Sequence 2:NP_014800.3 Gene:PUP1 / 854328 SGDID:S000005683 Length:261 Species:Saccharomyces cerevisiae


Alignment Length:173 Identity:47/173 - (27%)
Similarity:83/173 - (47%) Gaps:15/173 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 EAISHAGTCLGILAEDGILLAAECRSTNKLLDSAIPSEKIYRLNDNMVCSVAGITSDANVLTSEL 90
            :|.|...|.:|:...:|:::||:.|||...:.:.....|::|::..:.|:.||..:|...:|   
Yeast    24 KATSTGTTIVGVKFNNGVVIAADTRSTQGPIVADKNCAKLHRISPKIWCAGAGTAADTEAVT--- 85

  Fly    91 RLIAQRYQFS--YGEVIPCEQLVSHLCDIKQAYTQYGGKRPFGVSLLYMGWDNKYGYQLYQSDPS 153
            :||....:..  |....|  ::||.|..:||...:|.|.  .|..|:..|.| ..|..|:.....
Yeast    86 QLIGSNIELHSLYTSREP--RVVSALQMLKQHLFKYQGH--IGAYLIVAGVD-PTGSHLFSIHAH 145

  Fly   154 GNYGGWKATCIGNNFGAAISML----KQELADKENVKLTLADA 192
            |:........:|:...||:::|    ||:|..:|.:||. :||
Yeast   146 GSTDVGYYLSLGSGSLAAMAVLESHWKQDLTKEEAIKLA-SDA 187

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha3NP_476691.1 PTZ00246 1..245 CDD:173491 47/173 (27%)
proteasome_alpha_type_4 3..219 CDD:239721 47/173 (27%)
PUP1NP_014800.3 proteasome_beta_type_7 30..219 CDD:239732 45/167 (27%)
Pr_beta_C 223..257 CDD:403609
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0638
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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