DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha3 and PRE9

DIOPT Version :9

Sequence 1:NP_476691.1 Gene:Prosalpha3 / 37378 FlyBaseID:FBgn0261394 Length:264 Species:Drosophila melanogaster
Sequence 2:NP_011651.3 Gene:PRE9 / 853036 SGDID:S000003367 Length:258 Species:Saccharomyces cerevisiae


Alignment Length:260 Identity:132/260 - (50%)
Similarity:183/260 - (70%) Gaps:8/260 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 ARRYDSRTTIFSPEGRLYQVEYAMEAISHAGTCLGILAEDGILLAAECRSTNKLLDSAIPSEKIY 66
            :||||||||||||||||||||||:|:||||||.:||:|.|||:||||.:.|:.||:....:||:|
Yeast     3 SRRYDSRTTIFSPEGRLYQVEYALESISHAGTAIGIMASDGIVLAAERKVTSTLLEQDTSTEKLY 67

  Fly    67 RLNDNMVCSVAGITSDANVLTSELRLIAQRYQFSYGEVIPCEQLVSHLCDIKQAYTQYGGKRPFG 131
            :|||.:..:|||:|:||.:|.:..|:.||.|..:|.|.||.|.||..|.||||.|||:||.||||
Yeast    68 KLNDKIAVAVAGLTADAEILINTARIHAQNYLKTYNEDIPVEILVRRLSDIKQGYTQHGGLRPFG 132

  Fly   132 VSLLYMGWDNKYGYQLYQSDPSGNYGGWKATCIGNNFGAAISMLKQELADKENVKLTLADAKDLA 196
            ||.:|.|:|::||||||.|:|||||.||||..:|.|..||.::|:.:..|...|.    ||.:||
Yeast   133 VSFIYAGYDDRYGYQLYTSNPSGNYTGWKAISVGANTSAAQTLLQMDYKDDMKVD----DAIELA 193

  Fly   197 IKVLSMTLDTTKLTPEKVEMATLQR-VDNKTVYSVLEKP-DVEKLIEK--YTKVQAEAEAAKKEK 257
            :|.||.|.|::.||.:::|.||::: .::..||..:.|| :::.::.|  .||...:.||.:..|
Yeast   194 LKTLSKTTDSSALTYDRLEFATIRKGANDGEVYQKIFKPQEIKDILVKTGITKKDEDEEADEDMK 258

  Fly   258  257
            Yeast   259  258

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha3NP_476691.1 PTZ00246 1..245 CDD:173491 127/246 (52%)
proteasome_alpha_type_4 3..219 CDD:239721 121/215 (56%)
PRE9NP_011651.3 proteasome_alpha_type_4 4..216 CDD:239721 121/215 (56%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157345964
Domainoid 1 1.000 193 1.000 Domainoid score I617
eggNOG 1 0.900 - - E1_COG0638
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H2083
Inparanoid 1 1.050 248 1.000 Inparanoid score I665
Isobase 1 0.950 - 0 Normalized mean entropy S260
OMA 1 1.010 - - QHG54118
OrthoFinder 1 1.000 - - FOG0003645
OrthoInspector 1 1.000 - - otm46517
orthoMCL 1 0.900 - - OOG6_101968
Panther 1 1.100 - - LDO PTHR11599
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1006
SonicParanoid 1 1.000 - - X2516
TreeFam 1 0.960 - -
1615.740

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