DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha3 and PAB1

DIOPT Version :10

Sequence 1:NP_476691.1 Gene:Prosalpha3 / 37378 FlyBaseID:FBgn0261394 Length:264 Species:Drosophila melanogaster
Sequence 2:NP_173096.1 Gene:PAB1 / 838217 AraportID:AT1G16470 Length:235 Species:Arabidopsis thaliana


Alignment Length:40 Identity:8/40 - (20%)
Similarity:17/40 - (42%) Gaps:10/40 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 QEKQAAANFTACNLCIIKLVQQ----------HLNSVVEF 44
            :||..:.:.||.....:.:|.:          |.::|:.|
plant    28 EEKTHSFDLTANPPIDLNIVDELPRDEHLGVSHADNVIGF 67

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha3NP_476691.1 proteasome_alpha_type_4 3..219 CDD:239721 8/40 (20%)
PAB1NP_173096.1 proteasome_alpha_type_2 6..232 CDD:239719 8/40 (20%)

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