DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha3 and Psmb11

DIOPT Version :9

Sequence 1:NP_476691.1 Gene:Prosalpha3 / 37378 FlyBaseID:FBgn0261394 Length:264 Species:Drosophila melanogaster
Sequence 2:NP_780413.1 Gene:Psmb11 / 73902 MGIID:1921152 Length:302 Species:Mus musculus


Alignment Length:184 Identity:38/184 - (20%)
Similarity:69/184 - (37%) Gaps:39/184 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 ISHAGTCLGILAEDGILLAAECRSTNKLLDSAIPSEKIYRLNDNMVCSVAGITSDA----NVLTS 88
            ::|..|.|......|::.||:.||:.....:...|.|:..::..::.:.:|.::|.    .||..
Mouse    46 LAHGTTTLAFRFRHGVIAAADTRSSCGSYVACPASRKVIPVHQRLLGTTSGTSADCATWYRVLRR 110

  Fly    89 ELRLIAQRYQFSYGEVIPCEQLVSHLCDIKQAYTQYGGKRPFGVSL----LYMGWDNKYGYQLYQ 149
            ||||    .:...|::.........|..:...|.        |:.|    ...|||:        
Mouse   111 ELRL----RELREGQLPSVAGTAKLLAAMMSCYR--------GLDLCVATALCGWDH-------- 155

  Fly   150 SDPSGNYGGWKATC-------IGNNFGAAISMLKQELADKENVKLTLADAKDLA 196
            |.|:..|.....||       :|:....|..:|.:..    :..:|:.:|..||
Mouse   156 SGPALFYVYSDGTCLQGDIFSVGSGSPYAYGVLDRGY----HYDMTIQEAYTLA 205

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha3NP_476691.1 PTZ00246 1..245 CDD:173491 38/184 (21%)
proteasome_alpha_type_4 3..219 CDD:239721 38/184 (21%)
Psmb11NP_780413.1 20S_bact_beta 48..253 CDD:163402 38/182 (21%)
proteasome_beta_type_5 50..237 CDD:239730 37/180 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0638
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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