DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha3 and Psmb11

DIOPT Version :10

Sequence 1:NP_476691.1 Gene:Prosalpha3 / 37378 FlyBaseID:FBgn0261394 Length:264 Species:Drosophila melanogaster
Sequence 2:NP_780413.1 Gene:Psmb11 / 73902 MGIID:1921152 Length:302 Species:Mus musculus


Alignment Length:17 Identity:4/17 - (23%)
Similarity:9/17 - (52%) Gaps:0/17 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SKSSSSFVCDERRQEKQ 18
            |:|...|..|:..::.:
Mouse   257 SESEILFSADDEMEDSE 273

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha3NP_476691.1 proteasome_alpha_type_4 3..219 CDD:239721 3/16 (19%)
Psmb11NP_780413.1 proteasome_beta_type_5 50..237 CDD:239730
Blue background indicates that the domain is not in the aligned region.

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