DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha3 and PSMB2

DIOPT Version :10

Sequence 1:NP_476691.1 Gene:Prosalpha3 / 37378 FlyBaseID:FBgn0261394 Length:264 Species:Drosophila melanogaster
Sequence 2:NP_002785.1 Gene:PSMB2 / 5690 HGNCID:9539 Length:201 Species:Homo sapiens


Alignment Length:175 Identity:33/175 - (18%)
Similarity:75/175 - (42%) Gaps:18/175 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 LGILAEDGILLAAECRSTNKLLDSAIPSEKIYRLNDNMVCSVAGITSD----ANVLTSELRLIAQ 95
            :||...|.:|:|::..:.:.::......:|::::::.::....|...|    |..:...::|...
Human     5 IGIQGPDYVLVASDRVAASNIVQMKDDHDKMFKMSEKILLLCVGEAGDTVQFAEYIQKNVQLYKM 69

  Fly    96 RYQFSYGEVIPCEQLVSHLCDIKQAYTQYGGKRPFGVSLLYMGWDNKYGYQLYQSDPSGNYGGWK 160
            |..:.............:|.|..::.|      |:.|:||..|:|...|..||..|......  |
Human    70 RNGYELSPTAAANFTRRNLADCLRSRT------PYHVNLLLAGYDEHEGPALYYMDYLAALA--K 126

  Fly   161 ATCIGNNFGAAISMLKQELADKENVKLTLADAKDLAIKVLSMTLD 205
            |....:.:||.:::   .:.|:   ..|...:::.|:::|...|:
Human   127 APFAAHGYGAFLTL---SILDR---YYTPTISRERAVELLRKCLE 165

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha3NP_476691.1 proteasome_alpha_type_4 3..219 CDD:239721 33/175 (19%)
PSMB2NP_002785.1 proteasome_beta_type_2 1..192 CDD:239727 33/175 (19%)

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