DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha3 and PSMA2

DIOPT Version :9

Sequence 1:NP_476691.1 Gene:Prosalpha3 / 37378 FlyBaseID:FBgn0261394 Length:264 Species:Drosophila melanogaster
Sequence 2:NP_002778.1 Gene:PSMA2 / 5683 HGNCID:9531 Length:234 Species:Homo sapiens


Alignment Length:233 Identity:87/233 - (37%)
Similarity:119/233 - (51%) Gaps:24/233 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MARR-YDSRTTIFSPEGRLYQVEYAMEAISHAGTCLGILAEDGILLAAECRSTNKLLDSAIPSEK 64
            ||.| |....|.|||.|:|.|:|||:.|::.....:||.|.:|::||.|.:..:.|.|.. ...|
Human     1 MAERGYSFSLTTFSPSGKLVQIEYALAAVAGGAPSVGIKAANGVVLATEKKQKSILYDER-SVHK 64

  Fly    65 IYRLNDNMVCSVAGITSDANVLTSELRLIAQRYQFSYGEVIPCEQLVSHLCDIKQAYTQYGGKRP 129
            :..:..::....:|:..|..||....|.:||:|...|.|.||..|||..:..:.|.|||.||.||
Human    65 VEPITKHIGLVYSGMGPDYRVLVHRARKLAQQYYLVYQEPIPTAQLVQRVASVMQEYTQSGGVRP 129

  Fly   130 FGVSLLYMGWDNKYGYQLYQSDPSGNYGGWKATCIGNNFGAAISMLKQELADKENVKLTLADAKD 194
            ||||||..||:....| |:||||||.|..||||.:|.|:....:.|::    :.|..|.|.||..
Human   130 FGVSLLICGWNEGRPY-LFQSDPSGAYFAWKATAMGKNYVNGKTFLEK----RYNEDLELEDAIH 189

  Fly   195 LAIKVL------SMTLDT-----------TKLTPEKVE 215
            .||..|      .||.|.           .:|||.:|:
Human   190 TAILTLKESFEGQMTEDNIEVGICNEAGFRRLTPTEVK 227

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha3NP_476691.1 PTZ00246 1..245 CDD:173491 87/233 (37%)
proteasome_alpha_type_4 3..219 CDD:239721 85/231 (37%)
PSMA2NP_002778.1 proteasome_alpha_type_2 6..231 CDD:239719 84/228 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1222564at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.920

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