DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha3 and psma2a

DIOPT Version :10

Sequence 1:NP_476691.1 Gene:Prosalpha3 / 37378 FlyBaseID:FBgn0261394 Length:264 Species:Drosophila melanogaster
Sequence 2:NP_001019612.1 Gene:psma2a / 554153 ZFINID:ZDB-GENE-050522-479 Length:234 Species:Danio rerio


Alignment Length:233 Identity:88/233 - (37%)
Similarity:119/233 - (51%) Gaps:24/233 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MARR-YDSRTTIFSPEGRLYQVEYAMEAISHAGTCLGILAEDGILLAAECRSTNKLLDSAIPSEK 64
            ||.| |....|.|||.|:|.|:|||:.|::.....:||.|.:|::||.|.:..:.|.|.. ...|
Zfish     1 MAERGYSFSLTTFSPSGKLVQIEYALAAVAAGAPSVGIKASNGVVLATEKKQKSILYDEQ-SVHK 64

  Fly    65 IYRLNDNMVCSVAGITSDANVLTSELRLIAQRYQFSYGEVIPCEQLVSHLCDIKQAYTQYGGKRP 129
            :..:..::....:|:..|..||....|.:||:|...|.|.||..|||..:..:.|.|||.||.||
Zfish    65 VEPITKHIGMVYSGMGPDYRVLVRRARKLAQQYFLVYQEPIPTGQLVQRVASVMQEYTQSGGVRP 129

  Fly   130 FGVSLLYMGWDNKYGYQLYQSDPSGNYGGWKATCIGNNFGAAISMLKQELADKENVKLTLADAKD 194
            ||||||..|||....| |:||||||.|..||||.:|.|:....:.|::    :.|..|.|.||..
Zfish   130 FGVSLLIAGWDEDRPY-LFQSDPSGAYFAWKATAMGKNYVNGKTFLEK----RYNEDLELEDAIH 189

  Fly   195 LAIKVL------SMTLDT-----------TKLTPEKVE 215
            .||..|      .||.|.           .:|||.:|:
Zfish   190 TAILTLKESFEGQMTEDNIEVGICNEAGFRRLTPAEVK 227

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha3NP_476691.1 proteasome_alpha_type_4 3..219 CDD:239721 86/231 (37%)
psma2aNP_001019612.1 proteasome_alpha_type_2 6..231 CDD:239719 85/228 (37%)

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