DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha3 and psma4

DIOPT Version :9

Sequence 1:NP_476691.1 Gene:Prosalpha3 / 37378 FlyBaseID:FBgn0261394 Length:264 Species:Drosophila melanogaster
Sequence 2:NP_001007998.1 Gene:psma4 / 493360 XenbaseID:XB-GENE-5837209 Length:261 Species:Xenopus tropicalis


Alignment Length:264 Identity:182/264 - (68%)
Similarity:216/264 - (81%) Gaps:3/264 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MARRYDSRTTIFSPEGRLYQVEYAMEAISHAGTCLGILAEDGILLAAECRSTNKLLDSAIPSEKI 65
            |:||||||||||||||||||||||||||.||||||||||.||:|||||.|:.:||||....||||
 Frog     1 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILANDGVLLAAERRNIHKLLDEVFFSEKI 65

  Fly    66 YRLNDNMVCSVAGITSDANVLTSELRLIAQRYQFSYGEVIPCEQLVSHLCDIKQAYTQYGGKRPF 130
            |:|||:|.||||||||||||||:|||||||||...|.|.|||||||:.||||||||||:||||||
 Frog    66 YKLNDDMACSVAGITSDANVLTNELRLIAQRYLLQYQEPIPCEQLVTALCDIKQAYTQFGGKRPF 130

  Fly   131 GVSLLYMGWDNKYGYQLYQSDPSGNYGGWKATCIGNNFGAAISMLKQELADKENVKLTLADAKDL 195
            ||||||:|||..||:||||||||||||||||||||||..||:|||||:..:.:   :||..|..|
 Frog   131 GVSLLYIGWDKHYGFQLYQSDPSGNYGGWKATCIGNNSAAAVSMLKQDYKEGD---MTLKSALAL 192

  Fly   196 AIKVLSMTLDTTKLTPEKVEMATLQRVDNKTVYSVLEKPDVEKLIEKYTKVQAEAEAAKKEKQAK 260
            |:|||:.|:|.:||:.||||:|||.|.:.||...||::.:||:||:.:.:.:|:.|..||||:.|
 Frog   193 AVKVLNKTMDVSKLSAEKVEIATLTRENGKTKIRVLKQKEVEELIKLHEEEEAKIEREKKEKEQK 257

  Fly   261 QPTK 264
            :..|
 Frog   258 EKDK 261

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha3NP_476691.1 PTZ00246 1..245 CDD:173491 174/243 (72%)
proteasome_alpha_type_4 3..219 CDD:239721 162/215 (75%)
psma4NP_001007998.1 proteasome_alpha_type_4 3..216 CDD:239721 162/215 (75%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 277 1.000 Domainoid score I1702
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H2083
Inparanoid 1 1.050 361 1.000 Inparanoid score I2149
OMA 1 1.010 - - QHG54118
OrthoDB 1 1.010 - - D1222564at2759
OrthoFinder 1 1.000 - - FOG0003645
OrthoInspector 1 1.000 - - oto103520
Panther 1 1.100 - - LDO PTHR11599
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X2516
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1111.080

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