DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha3 and psmb10

DIOPT Version :10

Sequence 1:NP_476691.1 Gene:Prosalpha3 / 37378 FlyBaseID:FBgn0261394 Length:264 Species:Drosophila melanogaster
Sequence 2:NP_001002543.2 Gene:psmb10 / 436816 ZFINID:ZDB-GENE-040718-278 Length:276 Species:Danio rerio


Alignment Length:212 Identity:55/212 - (25%)
Similarity:97/212 - (45%) Gaps:21/212 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 EGRLYQVEYAMEAISHAGTCL-GILAEDGILLAAECRSTNKLLDSAIPSEKIYRLNDNMVCSVAG 78
            |..|.:..|:.......||.: |::.:||::|.|:.|:|:.::.:.....||:.:..|:.|..||
Zfish    25 EANLSEKGYSAPNARKTGTTIAGLVFKDGVILGADTRATDDMVVADKNCMKIHYIAPNIYCCGAG 89

  Fly    79 ITSDANVLTSELRLIAQRYQFSYGEVIPCEQLVSHLCDIKQAYTQYGGKRPFGVSLLYMGWDNKY 143
            :.:||.|.|..:....:.:..|.|.. |...:|:.  .:||...:|.|.  .|.||:..|.|.. 
Zfish    90 VAADAEVTTQMMSSNVELHSLSTGRP-PLVAMVTR--QLKQMLFRYQGH--IGSSLIVGGVDVN- 148

  Fly   144 GYQLYQSDPSGNYGGWKATCIGNNFGAAISMLKQELADKENVKLTLADAKDLAIKVLS------- 201
            |.|||...|.|:|.......:|:...:|||:.:    |:....:.|.:||.|....::       
Zfish   149 GAQLYSVYPHGSYDKLPFLTMGSGAASAISVFE----DRYKPNMELEEAKQLVRDAITAGIFCDL 209

  Fly   202 ---MTLDTTKLTPEKVE 215
               ..:|...:|.:||:
Zfish   210 GSGSNVDLCVITDKKVD 226

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha3NP_476691.1 proteasome_alpha_type_4 3..219 CDD:239721 55/212 (26%)
psmb10NP_001002543.2 proteasome_beta_type_7 43..231 CDD:239732 51/194 (26%)
Pr_beta_C 234..270 CDD:463597
Blue background indicates that the domain is not in the aligned region.

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