DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha3 and psma8

DIOPT Version :10

Sequence 1:NP_476691.1 Gene:Prosalpha3 / 37378 FlyBaseID:FBgn0261394 Length:264 Species:Drosophila melanogaster
Sequence 2:NP_998331.1 Gene:psma8 / 406445 ZFINID:ZDB-GENE-040426-2194 Length:251 Species:Danio rerio


Alignment Length:263 Identity:89/263 - (33%)
Similarity:148/263 - (56%) Gaps:17/263 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MARRYDSRTTIFSPEGRLYQVEYAMEAISHAGTCLGILAEDGILLAAECRSTNKLLDSAIPSEKI 65
            ||.|||...|:|||:|.|:|||||.||:....|.:||..:|.::|..|.:|..||.:.. ...||
Zfish     1 MAARYDRAITVFSPDGHLFQVEYAQEAVKKGSTAVGIRGKDIVVLGVEKKSVAKLQEER-TVRKI 64

  Fly    66 YRLNDNMVCSVAGITSDANVLTSELRLIAQRYQFSYGEVIPCEQLVSHLCDIKQAYTQYGGKRPF 130
            ..|::::..:.||:|:||.::.:..|:..|.::.:..:.:..|.:..::..:||.|||..|:|||
Zfish    65 CALDEHVCMAFAGLTADARIVINRARVECQSHRLTVEDPVTVEYITRYIATLKQRYTQSNGRRPF 129

  Fly   131 GVSLLYMGWDNKYGYQLYQSDPSGNYGGWKATCIGNNFGAAISMLKQELADK----ENVKLTLAD 191
            |:|.|.:|:|.....:|||:||||.|..|||..||.:.......|::...|:    :|      |
Zfish   130 GISALIVGFDYDGTPRLYQTDPSGTYHAWKANAIGRSAKTVREFLEKNYTDEAIASDN------D 188

  Fly   192 AKDLAIKVLSMTLDTTKLTPEKVEMATLQRVDNKTVYSVLEKPDVEKLIEKYTKVQAEAEAAKKE 256
            |..||||.|   |:..:...:.:|:|.::|  |:.: .:||..::|.|:.:..|.:.|....||:
Zfish   189 AIKLAIKAL---LEVVQSGGKNIELAVIRR--NQPL-KILESKEIETLVAEIEKEKEEEAEKKKQ 247

  Fly   257 KQA 259
            |::
Zfish   248 KKS 250

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha3NP_476691.1 proteasome_alpha_type_4 3..219 CDD:239721 76/219 (35%)
psma8NP_998331.1 proteasome_alpha_type_7 5..213 CDD:239724 75/217 (35%)

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