DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Prosalpha3 and psma7

DIOPT Version :9

Sequence 1:NP_476691.1 Gene:Prosalpha3 / 37378 FlyBaseID:FBgn0261394 Length:264 Species:Drosophila melanogaster
Sequence 2:NP_989071.1 Gene:psma7 / 394668 XenbaseID:XB-GENE-974596 Length:248 Species:Xenopus tropicalis


Alignment Length:257 Identity:81/257 - (31%)
Similarity:140/257 - (54%) Gaps:14/257 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 YDSRTTIFSPEGRLYQVEYAMEAISHAGTCLGILAEDGILLAAECRSTNKLLDSAIPSEKIYRLN 69
            ||...|:|||:|.|:|||||.||:....|.:|:..::.::|..|.:|..||.|.. ...||..|:
 Frog     3 YDRAITVFSPDGHLFQVEYAQEAVKKGSTAVGVRGKEIVVLGVEKKSVAKLQDER-TVRKICALD 66

  Fly    70 DNMVCSVAGITSDANVLTSELRLIAQRYQFSYGEVIPCEQLVSHLCDIKQAYTQYGGKRPFGVSL 134
            :|:..:.||:|:||.::.:..|:..|.::.:..:.:..|.:..::..:||.|||..|:||||:|.
 Frog    67 ENVFMAFAGLTADARIVINRARVECQSHRLTVEDPVTVEYITRYIASLKQRYTQSNGRRPFGISA 131

  Fly   135 LYMGWDNKYGYQLYQSDPSGNYGGWKATCIGNNFGAAISMLKQELADKENVKLTLADAKDLAIK- 198
            |.:|:|.....:|||:||||.|..|||..||....:....|::...|:      ..:..||.|| 
 Frog   132 LIVGFDFDGTPRLYQTDPSGTYHAWKANAIGRGAKSVREFLEKHYTDE------AIETDDLTIKL 190

  Fly   199 VLSMTLDTTKLTPEKVEMATLQRVDNKTVYSVLEKPDVEKLIEKYTKVQAEAEAAKKEKQAK 260
            |:...|:..:...:.:|:|.::|   .....:|...::|:.:   .:::.|.|..:|:||.|
 Frog   191 VIKALLEVVQSGGKNIELAVMRR---DQPLKILNPEEIERYV---AEIEKEKEENEKKKQKK 246

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha3NP_476691.1 PTZ00246 1..245 CDD:173491 75/240 (31%)
proteasome_alpha_type_4 3..219 CDD:239721 72/214 (34%)
psma7NP_989071.1 proteasome_alpha_type_7 3..211 CDD:239724 72/214 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1222564at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

Return to query results.
Submit another query.