DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha3 and Prosbeta5R2

DIOPT Version :10

Sequence 1:NP_476691.1 Gene:Prosalpha3 / 37378 FlyBaseID:FBgn0261394 Length:264 Species:Drosophila melanogaster
Sequence 2:NP_724081.1 Gene:Prosbeta5R2 / 318924 FlyBaseID:FBgn0051742 Length:279 Species:Drosophila melanogaster


Alignment Length:234 Identity:55/234 - (23%)
Similarity:102/234 - (43%) Gaps:32/234 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 QVEYAMEAISHAGTCLGILAEDGILLAAECRSTNKLLDSAIPSEKIYRLNDNMVCSVAGITSDA- 83
            |:::     .|..|.:|.:.:.||:|..:.|:|:..|..:....|:.::|..::.:.||..:|. 
  Fly    65 QIDF-----DHGTTTVGFVYQGGIILCVDSRATSGKLIGSQSIHKVVQVNQYIMGTTAGGAADCT 124

  Fly    84 ---NVLTSELRLIAQRYQFSYGEVIPCEQLVSHLCDIKQAYTQYGGKRPFGVSLLYMGWDNKYGY 145
               ..||.|.||    ::..|.|.:|.:....::.::...|...|    ..:.::..||..: |.
  Fly   125 YWDRALTRECRL----HELRYKERLPVQSAAKYISNVAAEYKGMG----LCMGMMLAGWSPE-GP 180

  Fly   146 QLYQSDPSGNYGGWKATCIGNNFGAAISMLKQELADKENVKLTLAD--AKDLA-IKVLSMTLDTT 207
            .|...|.:|.....|...:|:....|:.:|..:      .:|.|:|  |.||| :.|...|:  |
  Fly   181 SLVYVDSNGLRIHGKLFAVGSGAPNALGILDSD------YRLDLSDNEAYDLAFLAVYHATM--T 237

  Fly   208 KLTPEKVEMATLQRVDNKTVYSVLEKPDVEKLIEKYTKV 246
            .:....|  ..|..:|.....:|..| |.::|.|:|:.|
  Fly   238 DIFSGGV--VRLYHMDQGNWRNVANK-DCQELHEQYSGV 273

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha3NP_476691.1 proteasome_alpha_type_4 3..219 CDD:239721 46/205 (22%)
Prosbeta5R2NP_724081.1 proteasome_beta_type_5 72..259 CDD:239730 46/205 (22%)

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