DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha3 and Psma1

DIOPT Version :10

Sequence 1:NP_476691.1 Gene:Prosalpha3 / 37378 FlyBaseID:FBgn0261394 Length:264 Species:Drosophila melanogaster
Sequence 2:NP_058974.1 Gene:Psma1 / 29668 RGDID:61841 Length:263 Species:Rattus norvegicus


Alignment Length:265 Identity:75/265 - (28%)
Similarity:141/265 - (53%) Gaps:15/265 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 RYDSRTTIFSPEGRLYQVEYAMEAISHAGTCLGILAEDGILLAAECRSTNKLLDSAIPSEKIYRL 68
            :||:..|::||:||::|:||||||:......:|:.::...:|.|..|:.::|   |...:||..:
  Rat     5 QYDNDVTVWSPQGRIHQIEYAMEAVKQGSATVGLKSKTHAVLVALKRAQSEL---AAHQKKILHV 66

  Fly    69 NDNMVCSVAGITSDANVLTSELRLIAQRYQFSYGEVIPCEQLVSHLCDIKQAYTQYGGKRPFGVS 133
            ::::..|:||:|:||.:|.:.:|......:|.:...:|..:|||.:....|..||..|:||:||.
  Rat    67 DNHIGISIAGLTADARLLCNFMRQECLDSRFVFDRPLPVSRLVSLIGSKTQIPTQRYGRRPYGVG 131

  Fly   134 LLYMGWDNKYGYQLYQSDPSGNYGGWKATCIGNNFGAAISMLKQELADKENVKLTLADAKDLAIK 198
            ||..|:|: .|..::|:.||.||...:|..||....:|.:.|::.::  |.::..|.:.....::
  Rat   132 LLIAGYDD-MGPHVFQTCPSANYFDCRAMSIGARSQSARTYLERHMS--EFMQCNLDELVKHGLR 193

  Fly   199 VLSMTLDTTK-LTPEKVEMATLQRVDNKTVYSVLEKPDVEKLIE-----KYTKVQAEAEAAKKEK 257
            .|..||...: ||.:.|.:..:.:....|:|   :..||...::     ...|.|....|.:..:
  Rat   194 ALRETLPAEQDLTTKNVSIGIVGKDLEFTIY---DDDDVSPFLDGLEERPQRKAQPSQAADEPAE 255

  Fly   258 QAKQP 262
            :|.:|
  Rat   256 KADEP 260

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha3NP_476691.1 proteasome_alpha_type_4 3..219 CDD:239721 66/215 (31%)
Psma1NP_058974.1 proteasome_alpha_type_1 6..216 CDD:239718 66/215 (31%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 232..263 5/29 (17%)

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