DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Prosalpha3 and Psma5

DIOPT Version :10

Sequence 1:NP_476691.1 Gene:Prosalpha3 / 37378 FlyBaseID:FBgn0261394 Length:264 Species:Drosophila melanogaster
Sequence 2:NP_036097.1 Gene:Psma5 / 26442 MGIID:1347009 Length:241 Species:Mus musculus


Alignment Length:250 Identity:89/250 - (35%)
Similarity:137/250 - (54%) Gaps:31/250 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 YDSRTTIFSPEGRLYQVEYAMEAISHAGTCLGILAEDGILLAAECRSTNKLLDSAIPS--EKIYR 67
            ||.....|||||||:|||||:|||....|.:||...:|:.||.|.|.|:.|::   ||  |||..
Mouse     8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGIQTSEGVCLAVEKRITSPLME---PSSIEKIVE 69

  Fly    68 LNDNMVCSVAGITSDANVLTSELRLIAQRYQFSYGEVIPCE---QLVSHLCDIKQAYTQYGGK-- 127
            ::.::.|:::|:.:||..|..:.|:..|.:.|:|.|.:..|   |.||:|.      .|:|.:  
Mouse    70 IDAHIGCAMSGLIADAKTLIDKARVETQNHWFTYNETMTVESVTQAVSNLA------LQFGEEDA 128

  Fly   128 ------RPFGVSLLYMGWDNKYGYQLYQSDPSGNYGGWKATCIGNNFGAAISMLKQELADKENVK 186
                  |||||:||:.|.|.| |.||:..||||.:....|..||:....|.|.| ||:..|   .
Mouse   129 DPGAMSRPFGVALLFGGVDEK-GPQLFHMDPSGTFVQCDARAIGSASEGAQSSL-QEVYHK---S 188

  Fly   187 LTLADAKDLAIKVLSMTLDTTKLTPEKVEMATLQRVDNKTVYSVLEKPDVEKLIE 241
            :||.:|...::.:|...:: .||....:|:||:|...|   :.:..|.::|::|:
Mouse   189 MTLKEAIKSSLIILKQVME-EKLNATNIELATVQPGQN---FHMFTKEELEEVIK 239

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha3NP_476691.1 proteasome_alpha_type_4 3..219 CDD:239721 83/226 (37%)
Psma5NP_036097.1 proteasome_alpha_type_5 8..220 CDD:239722 83/226 (37%)

Return to query results.
Submit another query.