DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha3 and pas-7

DIOPT Version :9

Sequence 1:NP_476691.1 Gene:Prosalpha3 / 37378 FlyBaseID:FBgn0261394 Length:264 Species:Drosophila melanogaster
Sequence 2:NP_496177.2 Gene:pas-7 / 174571 WormBaseID:WBGene00003928 Length:250 Species:Caenorhabditis elegans


Alignment Length:255 Identity:76/255 - (29%)
Similarity:130/255 - (50%) Gaps:28/255 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 YDSRTTIFSPEGRLYQVEYAMEAISHAGTCLGILAEDGILLAAECRSTNKL-LDSAIPSEKIYRL 68
            ||...:.|||:||::|||||.:|:.:|||.:.|..::|:::.|:...::|| .|:|.|  :::.:
 Worm     8 YDLAASTFSPDGRIFQVEYAQKAVDNAGTMIAIRGKNGVVVVADKLISSKLYTDNANP--RMFNV 70

  Fly    69 NDNMVCSVAGITSDANVLTSELRLIAQRYQFSYGEVIPCEQLVSHLCDIKQAYTQYGGKRPFGVS 133
            |||:..:|||...|...|.:.....|.::...|.|.:|.:.:.:.:.:....:| .|..||||..
 Worm    71 NDNVGVAVAGNYPDGFALKNYAYGEAMKWLKDYREPMPIQNIANSVAEYIHIHT-LGISRPFGAG 134

  Fly   134 LLYMGWDNKYGYQLYQSDPSG-NYGGWKATCIGNNFGAAISMLKQELADKENVKLTLADAKDLAI 197
            ..:|.|:.:.|.:|:..:||| || .:||..:|.:..||    |.|:   |.:|:.         
 Worm   135 AFFMSWNKQTGGRLFLVEPSGLNY-EYKAWAVGKHRQAA----KAEI---EKLKIE--------- 182

  Fly   198 KVLSMTLDTTKLTPEKVEMATLQRVDNKTVYSVLEKPDV-EKLIEKYTKVQAEAEAAKKE 256
                 .||..:|..|...:..:.|.:||.....:|...| |:...||.:|.:|...|.:|
 Worm   183 -----ELDVNQLVKEAARIIMVVRDENKDKNVQIEMGWVGEQTNGKYEEVPSEVVTAAEE 237

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha3NP_476691.1 PTZ00246 1..245 CDD:173491 72/242 (30%)
proteasome_alpha_type_4 3..219 CDD:239721 64/215 (30%)
pas-7NP_496177.2 proteasome_alpha_type_3 5..216 CDD:239720 68/232 (29%)
PRE1 6..231 CDD:223711 73/247 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0638
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1222564at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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