DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Prosalpha3 and pbs-5

DIOPT Version :10

Sequence 1:NP_476691.1 Gene:Prosalpha3 / 37378 FlyBaseID:FBgn0261394 Length:264 Species:Drosophila melanogaster
Sequence 2:NP_493558.1 Gene:pbs-5 / 173334 WormBaseID:WBGene00003951 Length:284 Species:Caenorhabditis elegans


Alignment Length:156 Identity:40/156 - (25%)
Similarity:69/156 - (44%) Gaps:17/156 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 GILLAAECRSTNKLLDSAIPSEKIYRLNDNMVCSVAGITSDANVLTSELRLIAQRYQFSYGEVIP 106
            ||::|.:.|:::....|:....||..:.|.||.::||..:|....|   |::|:     |..:..
 Worm    82 GIIVAVDSRASSGEYISSKSVMKILDIGDRMVATMAGGAADCQFWT---RIVAK-----YCTLYE 138

  Fly   107 CEQLVSHLCDIKQAY---TQYGGK-RPFGVSLLYMGWDNKYGYQLYQSDPSGNYGGWKATCIG-- 165
            ..:..|........|   |.||.: :...|..:..|:|.| |.|:::.|..|:....|...:|  
 Worm   139 LREKTSITVSAASKYFANTLYGYRGQGLSVGSMVAGYDKK-GPQIFKVDSEGDRCQLKVCSVGSG 202

  Fly   166 --NNFGAAISMLKQELADKENVKLTL 189
              |.:|...:..|.::.|.|..||.|
 Worm   203 SLNAYGILDNHYKPKMTDDEARKLGL 228

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha3NP_476691.1 proteasome_alpha_type_4 3..219 CDD:239721 40/156 (26%)
pbs-5NP_493558.1 Ntn_hydrolase 65..252 CDD:469781 40/156 (26%)

Return to query results.
Submit another query.