DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha3 and pas-4

DIOPT Version :10

Sequence 1:NP_476691.1 Gene:Prosalpha3 / 37378 FlyBaseID:FBgn0261394 Length:264 Species:Drosophila melanogaster
Sequence 2:NP_492360.1 Gene:pas-4 / 172679 WormBaseID:WBGene00003925 Length:253 Species:Caenorhabditis elegans


Alignment Length:260 Identity:82/260 - (31%)
Similarity:149/260 - (57%) Gaps:15/260 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 RYDSRTTIFSPEGRLYQVEYAMEAISHAGTCLGILAEDGILLAAECRSTNKLLDSAIPSEKIYRL 68
            |||...|||||:|.|:|||||.||:....|.:|:..:|.|::..|.:|...|.|.. ...||:.:
 Worm     3 RYDRAITIFSPDGHLFQVEYAQEAVKKGSTAVGVRGKDCIVIGVEKKSIPALQDDR-TIRKIHMI 66

  Fly    69 NDNMVCSVAGITSDANVLTSELRLIAQRYQFSYGEVIPCEQLVSHLCDIKQAYTQYGGKRPFGVS 133
            :|:::.:.||:::||.||....|:..|.|:.:..:.:....:..::.:.||.:||..|:||||:|
 Worm    67 DDHVMLAFAGLSADARVLVDRARIECQSYKLTLEDPVTVAYISRYIANTKQRFTQSPGRRPFGIS 131

  Fly   134 LLYMGWDNKYGYQLYQSDPSGNYGGWKATCIGNNFGAAISMLKQELADKENVKLTLADAKDLAIK 198
            :|..|:|:....:|::::|||.|..:.|...|.........|:::.:: ||   |:.:|..|.:.
 Worm   132 MLIGGFDHDGTPRLFKTEPSGAYYEYVANATGRGEKPVREYLEEQYSE-EN---TVDEATTLKLV 192

  Fly   199 VLSMTLDTTKLTP---EKVEMATLQRVDNKTVYSVLEKPDVEKLIE--KYTKVQAEA-EAAKKEK 257
            |.|:    .::.|   :.:|:|.:::|:::....||...::|.|::  :..:|.||| |||.|:|
 Worm   193 VKSL----AQVVPPGSQNIEIAVMKKVNDELQQRVLSTEEIEALLKVVETERVAAEAEEAASKKK 253

  Fly   258  257
             Worm   254  253

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha3NP_476691.1 proteasome_alpha_type_4 3..219 CDD:239721 68/217 (31%)
pas-4NP_492360.1 proteasome_alpha_type_7 4..212 CDD:239724 67/216 (31%)

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