DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha3 and pas-3

DIOPT Version :9

Sequence 1:NP_476691.1 Gene:Prosalpha3 / 37378 FlyBaseID:FBgn0261394 Length:264 Species:Drosophila melanogaster
Sequence 2:NP_001379751.1 Gene:pas-3 / 172139 WormBaseID:WBGene00003924 Length:250 Species:Caenorhabditis elegans


Alignment Length:256 Identity:164/256 - (64%)
Similarity:198/256 - (77%) Gaps:6/256 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MARRYDSRTTIFSPEGRLYQVEYAMEAISHAGTCLGILAEDGILLAAECRSTNKLLDSAIPSEKI 65
            ||||||||||||||||||||||||||||||||||||||:.:||::|||.::.:||||.::.:||:
 Worm     1 MARRYDSRTTIFSPEGRLYQVEYAMEAISHAGTCLGILSSEGIVVAAERKNVHKLLDDSVMTEKV 65

  Fly    66 YRLNDNMVCSVAGITSDANVLTSELRLIAQRYQFSYGEVIPCEQLVSHLCDIKQAYTQYGGKRPF 130
            |||:||:.|:|||||:|||:|.:.||..|..|:.||||.:|.||||.:||:.||.|||.||||||
 Worm    66 YRLSDNISCTVAGITADANILINHLRWWAASYRNSYGEEMPVEQLVQNLCNEKQRYTQIGGKRPF 130

  Fly   131 GVSLLYMGWDNKYGYQLYQSDPSGNYGGWKATCIGNNFGAAISMLKQELADKENVKLTLADAKDL 195
            ||||||:|||..||||||||||||||.||||||||:|..||:::||||....     .|.:||.|
 Worm   131 GVSLLYIGWDKHYGYQLYQSDPSGNYTGWKATCIGSNHQAAVTLLKQEYKSP-----NLEEAKQL 190

  Fly   196 AIKVLSMTLDTTKLTPEKVEMATLQRVDNKTVYSVLEKPDVEKLIEKYTKVQAEAEAAKKE 256
            |||||..||| .||..||||||.|.|.|.|||...|...:|:.||.::.|.:.|||.|:|:
 Worm   191 AIKVLWKTLD-VKLASEKVEMAVLTRRDGKTVLEELTTKEVDALIAEHEKKEKEAETAEKK 250

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha3NP_476691.1 PTZ00246 1..245 CDD:173491 158/243 (65%)
proteasome_alpha_type_4 3..219 CDD:239721 146/215 (68%)
pas-3NP_001379751.1 proteasome_alpha_type_4 3..213 CDD:239721 146/215 (68%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160166112
Domainoid 1 1.000 237 1.000 Domainoid score I1297
eggNOG 1 0.900 - - E1_COG0638
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H2083
Inparanoid 1 1.050 318 1.000 Inparanoid score I1509
Isobase 1 0.950 - 0 Normalized mean entropy S260
OMA 1 1.010 - - QHG54118
OrthoDB 1 1.010 - - D1222564at2759
OrthoFinder 1 1.000 - - FOG0003645
OrthoInspector 1 1.000 - - otm14587
orthoMCL 1 0.900 - - OOG6_101968
Panther 1 1.100 - - LDO PTHR11599
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1006
SonicParanoid 1 1.000 - - X2516
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1615.790

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