DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Prosalpha3 and psma5

DIOPT Version :9

Sequence 1:NP_476691.1 Gene:Prosalpha3 / 37378 FlyBaseID:FBgn0261394 Length:264 Species:Drosophila melanogaster
Sequence 2:NP_001096282.1 Gene:psma5 / 100124849 XenbaseID:XB-GENE-982653 Length:241 Species:Xenopus tropicalis


Alignment Length:250 Identity:88/250 - (35%)
Similarity:136/250 - (54%) Gaps:31/250 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 YDSRTTIFSPEGRLYQVEYAMEAISHAGTCLGILAEDGILLAAECRSTNKLLDSAIPS--EKIYR 67
            ||.....|||||||:|||||:|||....|.:||...:|:.||.|.|.|:.|::   ||  |||..
 Frog     8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGIQTSEGVCLAVEKRITSPLME---PSSIEKIVE 69

  Fly    68 LNDNMVCSVAGITSDANVLTSELRLIAQRYQFSYGEVIPCE---QLVSHLCDIKQAYTQYGGK-- 127
            ::.::.|:::|:.:||..|..:.|:..|.:.|:|.|.:..|   |.||:|.      .|:|.:  
 Frog    70 IDAHIGCAMSGLIADAKTLIDKARVETQNHWFTYNETMTVESVTQAVSNLA------LQFGEEDA 128

  Fly   128 ------RPFGVSLLYMGWDNKYGYQLYQSDPSGNYGGWKATCIGNNFGAAISMLKQELADKENVK 186
                  |||||:||:.|.|.| |.||:..||||.:....|..||:....|.|.| ||:..|   .
 Frog   129 DPGAMSRPFGVALLFGGADEK-GPQLFHMDPSGTFVQCDARAIGSASEGAQSSL-QEVYHK---S 188

  Fly   187 LTLADAKDLAIKVLSMTLDTTKLTPEKVEMATLQRVDNKTVYSVLEKPDVEKLIE 241
            :||.:|...::.:|...:: .||....:|:||::......:|.   |.::|::|:
 Frog   189 MTLKEAIKSSLTILKQVME-EKLNATNIELATIEPGKKFHMYC---KEELEEVIK 239

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha3NP_476691.1 PTZ00246 1..245 CDD:173491 88/249 (35%)
proteasome_alpha_type_4 3..219 CDD:239721 83/226 (37%)
psma5NP_001096282.1 proteasome_alpha_type_5 8..220 CDD:239722 83/226 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1222564at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

Return to query results.
Submit another query.