DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3216 and GLR2.7

DIOPT Version :10

Sequence 1:NP_726013.2 Gene:CG3216 / 37376 FlyBaseID:FBgn0034568 Length:1161 Species:Drosophila melanogaster
Sequence 2:NP_180476.3 Gene:GLR2.7 / 817460 AraportID:AT2G29120 Length:952 Species:Arabidopsis thaliana


Alignment Length:495 Identity:100/495 - (20%)
Similarity:180/495 - (36%) Gaps:138/495 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    91 VGVLMASHLDSPFDLERCGPAVDLALDEINKVFLKPHN-------ITLLKKKGSYPSCSGARAPG 148
            |||::..|  :.|. :.|..:::::|.:    |.|.|:       |.:..........|.|    
plant    41 VGVVLDLH--TSFS-KLCLTSINISLSD----FYKYHSDYTTRLAIHIRDSMEDVVQASSA---- 94

  Fly   149 LAADMYFQDDVIAFIGPACAFALEPVARLAAYWNKPIITGMGDQPPSSEGELTVTSGILGRIHKW 213
             |.|:...:.|.|.|||..:...|.:.|||.....|.||            .:.|..:|..|:. 
plant    95 -ALDLIKNEQVSAIIGPRTSMQAEFMIRLADKSQVPTIT------------FSATCPLLTSINS- 145

  Fly   214 KNENTGMFKDKSKYPTLTRMSYCQCRLILVFASVIRQFNW-NHVALLVDRSELFSWTVGKNLEYG 277
                          |...|.:......:...|::::.|.| |.||:.||.            |:|
plant   146 --------------PYFVRATLDDSSQVKAIAAIVKSFGWRNVVAIYVDN------------EFG 184

  Fly   278 LRQEGLLSFVKEL----------------NGNEEEVYENYLKDASMYARVVILSVRGVLVRKFML 326
               ||:|..:.:.                ..|::::.:...|..:|..||.::.:...|..:|..
plant   185 ---EGILPLLTDALQDVQAFVVNRCLIPQEANDDQILKELYKLMTMQTRVFVVHMPPTLGFRFFQ 246

  Fly   327 AAHSLGMTNGEWVFLDVEIFQSEYWGDKGWEMKDEHDAKARKAYEALLRVSLLQPTSPKFQDFAD 391
            .|..:||....:|:|..:...:        .:|......:.:..:.:|.|....|.|.|.::|  
plant   247 KAREIGMMEEGYVWLLTDGVMN--------LLKSNERGSSLENMQGVLGVRSHIPKSKKLKNF-- 301

  Fly   392 NVRENALYDYNYTFGEGEEVNFFIGAFYDGVYLLGMALNET----------LTEG---------G 437
            .:|...::...   |..||:|.|....||.:..|.||:.:|          :..|         |
plant   302 RLRWEKMFPKK---GNDEEMNIFALRAYDSITALAMAVEKTNIKSLRYDHPIASGNNKTNLGTLG 363

  Fly   438 DIRDGVNITRRMWNRTFEGITGHVRIDDNGDRDADYSILDL--------------DPINGKFSVV 488
            ..|.|.::.:.:.|..|.|:.|...: .||..::  |:.|:              .|.||..:..
plant   364 VSRYGPSLLKALSNVRFNGLAGEFEL-INGQLES--SVFDVINIIGSEERIIGLWRPSNGIVNAK 425

  Fly   489 AHYSGVHKVYSAVHGKK---IHWPGGREEPPP--DVPPCG 523
            :      |..::|.|::   :.|||..::.|.  .:|..|
plant   426 S------KNTTSVLGERLGPVIWPGKSKDVPKGWQIPTNG 459

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3216NP_726013.2 PBP1_NPR_GC-like 90..501 CDD:380575 92/466 (20%)
Protein Kinases, catalytic domain 616..885 CDD:473864
HNOBA <891..939 CDD:462234
CYCc 918..1109 CDD:214485
GLR2.7NP_180476.3 PBP1_GABAb_receptor_plant 40..423 CDD:380645 91/451 (20%)
GluR_Plant 460..799 CDD:270404 100/495 (20%)
Lig_chan 582..832 CDD:459656
Blue background indicates that the domain is not in the aligned region.

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