DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3216 and GLR2.9

DIOPT Version :10

Sequence 1:NP_726013.2 Gene:CG3216 / 37376 FlyBaseID:FBgn0034568 Length:1161 Species:Drosophila melanogaster
Sequence 2:NP_001325277.1 Gene:GLR2.9 / 817458 AraportID:AT2G29100 Length:942 Species:Arabidopsis thaliana


Alignment Length:485 Identity:90/485 - (18%)
Similarity:171/485 - (35%) Gaps:130/485 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    91 VGVLMASHLDSPFDLERCGPAVDLALDEINKVFLKPH-----NITLLKKKGSYPSCSGARAPGLA 150
            |||::  .|::.|. :.|..::.:|:.:    |...|     .:||..:.....:   .:|...|
plant    34 VGVVL--DLNTTFS-KICLTSIKMAVSD----FYADHPNYLTRLTLHVRDSMEDT---VQASAAA 88

  Fly   151 ADMYFQDDVIAFIGPACAFALEPVARLAAYWNKPIITGMGDQPPSSEGELTVTSGILGRIHKWKN 215
            .|:...:.|.|.|||..:...:.:.:||.....|.||            .:.||.:|..|     
plant    89 LDLIKTEQVSAIIGPINSMQADFMIKLANKTQVPTIT------------FSATSPLLTSI----- 136

  Fly   216 ENTGMFKDKSKYPTLTRMSYCQCRLILVFASVIRQFNWNH-VALLVDRSELFSWTVGKNLEYGLR 279
                      |.|...|.:......:...||:.:.|.|.. ||:.||.            |:|  
plant   137 ----------KSPYFVRATIDDSSQVRAIASIFKFFRWRRVVAIYVDN------------EFG-- 177

  Fly   280 QEGLLSFVKEL-------------NGNEEEVYENYLKDASMYARVVILSVRGVLVRKFMLAAHSL 331
             ||.:.|:.:.             ...::|:.:...|.....|||.::.:...|..:....|..:
plant   178 -EGFMPFLFDALQDVEVKRSVIPPEAIDDEIQKELRKLMERQARVFVVHMESSLALRVFQIARDI 241

  Fly   332 GMTNGEWVFLDVEIFQSEYWGDKGWE--MKDEHDAKARKAYEALLRVSLLQPTSPKFQDFADNVR 394
            ||....:|:|..          .|..  |:..::.::....|.:|.|....|.|.:..||  .:|
plant   242 GMMEEGYVWLMT----------NGMTHMMRHINNGRSLNTIEGVLGVRSHVPKSKELGDF--RLR 294

  Fly   395 ENALYDYNYTFGE-----GEEVNFFIGAFYDGVYLLGMALNETLTEGGDIRDGVNITRRMWNRT- 453
                  :..||.:     .:::|.|....||.:..|..|:.:..|:.....:|..:::   ||| 
plant   295 ------WKRTFEKENPSMRDDLNVFALWAYDSITALAKAVEKANTKSLWYDNGSTLSK---NRTD 350

  Fly   454 ---------------------FEGITGHVRIDDNGDRDADYSILDLDPINGKFSVVAHYSGVHKV 497
                                 |.|:.|..::.|...:...:.|::.  :..:..::..::....:
plant   351 LGNVGVSLYGPSLQKAFSEVRFNGLAGEFKLIDGQLQSPKFEIINF--VGNEERIIGFWTPRDGL 413

  Fly   498 YSAVHGKK-----IHWPGGREEPPP--DVP 520
            ..|....|     :.|||..:..|.  ::|
plant   414 MDATSSNKKTLGPVIWPGKSKIVPKGWEIP 443

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3216NP_726013.2 PBP1_NPR_GC-like 90..501 CDD:380575 83/457 (18%)
Protein Kinases, catalytic domain 616..885 CDD:473864
HNOBA <891..939 CDD:462234
CYCc 918..1109 CDD:214485
GLR2.9NP_001325277.1 PBP1_GABAb_receptor_plant 33..415 CDD:380645 83/455 (18%)
GluR_Plant 445..788 CDD:270404
Lig_chan 568..821 CDD:459656
Blue background indicates that the domain is not in the aligned region.

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