DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3216 and GLR2.2

DIOPT Version :10

Sequence 1:NP_726013.2 Gene:CG3216 / 37376 FlyBaseID:FBgn0034568 Length:1161 Species:Drosophila melanogaster
Sequence 2:NP_180048.1 Gene:GLR2.2 / 817008 AraportID:AT2G24720 Length:920 Species:Arabidopsis thaliana


Alignment Length:763 Identity:145/763 - (19%)
Similarity:244/763 - (31%) Gaps:249/763 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   128 NITLLKKKG-SYPSCSGARAPGLAADMY-----FQDDVIAFIGP-------ACAFALEPVARLAA 179
            ||.::...| |||..:........||.|     ||..::..:|.       |...|::.:.    
plant    33 NIGVVSDVGTSYPDVAMLCINMSLADFYSSRPQFQTRLVVNVGDSKNDVVGAATAAIDLIK---- 93

  Fly   180 YWNKPIITGMGDQPPSSEGELTVTSGILGRIHKWKNENTGMFKDKSKYPTLTRMSYCQCRLILVF 244
              ||.:...:|.. .|.:....:..|...|:.......|.......:.|...|.:|.....:...
plant    94 --NKQVKAILGPW-TSMQAHFLIEIGQKSRVPVVSYSATSPSLTSLRSPYFFRATYEDSSQVHAI 155

  Fly   245 ASVIRQFNWNHVA-LLVDRSELFSWTVGKNLEYGLRQEGLLSFVKE----------------LNG 292
            .::|:.|.|..|. :.:|.:            :|   ||::..:.:                ||.
plant   156 KAIIKLFGWREVVPVYIDNT------------FG---EGIMPRLTDSLQDINVRIPYRSVIPLNA 205

  Fly   293 NEEEVYENYLKDASMYARVVILSVRGVLVRKFMLAAHSLGMTNG--EWVFLDVEIFQSEYWGDKG 355
            .::::....||..:|..||.|:.:...|.....:.|..||:...  .|:..:..:.......:.|
plant   206 TDQDISVELLKMMNMPTRVFIVHMSSSLASTVFIKAKELGLMKPGYVWILTNGVMDGLRSINETG 270

  Fly   356 WEMKDEHDAKARKAYEALLRVSLLQPTSPKFQDFADNVRENALYDYNYTFGEGEEVNFFIGAFYD 420
            .|           |.|.:|.:....|.|...:.|...        :...|.: .|:|.:....||
plant   271 IE-----------AMEGVLGIKTYIPKSKDLETFRSR--------WKRRFPQ-MELNVYGLWAYD 315

  Fly   421 GVYLLGMALNETLTEGGDIRDGVNITRRMWNRTFEGITGHVRIDDNGDRDADYSILDLDPINGKF 485
            ....|.||:.:.         |:|      |.||..:       |.|...::...|.|.....| 
plant   316 ATTALAMAIEDA---------GIN------NMTFSNV-------DTGKNVSELDGLGLSQFGPK- 357

  Fly   486 SVVAHYSGVHKVYSAVHGKKI----HWPGGREEPPPDVPPCGFLGNSTDCVGNFSTIMYSVFGLL 546
                    :.:..|.|..|.:    |:..|:.:|                         |||.::
plant   358 --------LLQTVSTVQFKGLAGDFHFVSGQLQP-------------------------SVFEIV 389

  Fly   547 LFLGLVFLVICLLQKQMKLSKELNNMSWRVRPDDVLIEMGGMFGSKGGLQRLDVENISLQQFGIH 611
            ..:|               :.|.:...|        .|..|:      :::||.|          
plant   390 NMIG---------------TGERSIGFW--------TEGNGL------VKKLDQE---------- 415

  Fly   612 SGRASIASFTSLPPQVYTTIGQFKGERVAIKK-----VNVKKVDL-TPQLLW---EIKQARDVSH 667
              ..||.:.::.|..:...|  :.||.|::.|     .|.||:.: .|:.:.   .:|..||...
plant   416 --PRSIGTLSTWPDHLKHII--WPGEAVSVPKGWEIPTNGKKLRIGVPKRIGFTDLVKVTRDPIT 476

  Fly   668 ENTVRFVGACIDLPRPTVLILTEYCSRGSLKDVLENEAIELDWNF-------------RMSLIHD 719
            .:|| ..|.|||.                .:.|::....::.:.|             ...|:|.
plant   477 NSTV-VKGFCIDF----------------FEAVIQAMPYDVSYEFFPFEKPNGEPAGNHNDLVHQ 524

  Fly   720 IVKGMNYLHNSDVAAHGK--LRSCNCLIDGRFVLKISDFGLRTLTTPSDFV-RDQNYYLKLLWIA 781
            :     ||...|......  |.:.:..:|  |.|.....|:..:....|.| ||:..:||.|.|.
plant   525 V-----YLGQFDAVVGDTTILANRSSFVD--FTLPFMKSGVGLIVPLKDEVKRDKFSFLKPLSIE 582

  Fly   782 PELLPLTTIPGCCPATQRGDVYSF--GI---ILEEIVNRG--GP--YQ 820
               |.|||:           |:.|  ||   .||..||..  ||  ||
plant   583 ---LWLTTL-----------VFFFLVGISVWTLEHRVNSDFRGPANYQ 616

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3216NP_726013.2 PBP1_NPR_GC-like 90..501 CDD:380575 72/404 (18%)
Protein Kinases, catalytic domain 616..885 CDD:473864 57/239 (24%)
HNOBA <891..939 CDD:462234
CYCc 918..1109 CDD:214485
GLR2.2NP_180048.1 PBP1_GABAb_receptor_plant 33..412 CDD:380645 85/505 (17%)
GluR_Plant 452..801 CDD:270404 48/203 (24%)
Blue background indicates that the domain is not in the aligned region.

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