DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3216 and GLR2.3

DIOPT Version :10

Sequence 1:NP_726013.2 Gene:CG3216 / 37376 FlyBaseID:FBgn0034568 Length:1161 Species:Drosophila melanogaster
Sequence 2:NP_001325281.1 Gene:GLR2.3 / 817007 AraportID:AT2G24710 Length:919 Species:Arabidopsis thaliana


Alignment Length:583 Identity:110/583 - (18%)
Similarity:186/583 - (31%) Gaps:206/583 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 ISIHFFFLMYVNCFSAHPNPRRNDITWDDLNKDISLDSTTS---LAGLNASDAGLEQRMYERSRE 67
            |.:.|||.:..|      ..:.|..|..|:.....:|::.|   :..:|.|              
plant    34 ILLVFFFCLEFN------RGQNNGKTLVDVGVVTDVDTSHSKVVMLCINMS-------------- 78

  Fly    68 SKSTQLSRYTEVGEMGSTMRVYNVGVLMASHLDSPFDLERCGPAVDLALDEINKVFLKPHNITLL 132
                 :|.:........|..|.|||       ||..|:  .|.|: .|||             |:
plant    79 -----ISDFYSSNPQFETRLVVNVG-------DSKSDV--VGAAI-AALD-------------LI 115

  Fly   133 KKKGSYPSCSGARAPGLAADMYFQDDVIAFIGPACAFALEPVARLAAYWNKPIITGMGDQPPSSE 197
            |.|                      .|.|.:||..:.....:..:......||::          
plant   116 KNK----------------------QVKAILGPWTSMQAHFLIEIGQKSRVPIVS---------- 148

  Fly   198 GELTVTSGILGRIHKWKNENTGMFKDKSKYPTLTRMSYCQCRLILVFASVIRQFNWNHVA-LLVD 261
              .:.||.||..:               :.|...|.:|.....:....::|:.|.|..|. :.:|
plant   149 --YSATSPILTSL---------------RSPYFLRATYEDSFQVQPIKAIIKLFGWREVVPVYID 196

  Fly   262 RSELFSWTVGKNLEYGLRQEGLLSFVKE----------------LNGNEEEVYENYLKDASMYAR 310
            .:            :|   ||::..:.:                :|..:.|:....||..:|..|
plant   197 NT------------FG---EGIMPRLTDALQDINVRIPYRSVIAINATDHEISVELLKMMNMPTR 246

  Fly   311 VVILSVRGVLVRKFMLAAHSLG---------MTNGEWVFLDVEIFQSEYWGDKGWEMKDEHDAKA 366
            |.::.:...|..:|.:.|..||         :|||  |..|:.:.                :..|
plant   247 VFLVHMYYDLASRFFIKAKELGLMEPGYVWILTNG--VIDDLSLI----------------NETA 293

  Fly   367 RKAYEALLRVSLLQPTSPKFQDFADNVRENALYDYNYTFGEGEEVNFFIGAFYDGVYLLGMALNE 431
            .:|.|.:|.:....|.||..:.|....|.        .|...|...:.:.| ||....|.:|:.|
plant   294 VEAMEGVLGIKTYIPKSPDLEKFRSRWRS--------LFPRVELSVYGLWA-YDATTALAVAIEE 349

  Fly   432 TLTE----------GGDIRD---------GVNITRRMWNRTFEGITGHVRIDDNGDRDADYSILD 477
            ..|.          |.::.:         |..:.:.:....|.|:.|..|......:.:.:.|::
plant   350 AGTNNMTFSKVVDTGRNVSELEALGLSQFGPKLLQTLLTVQFRGLAGEFRFFRGQLQPSVFEIVN 414

  Fly   478 LDPIN-GKFSVVAHYSG---VHKV------YSAV-----HGKKIHWPGGREEPPP--DVPPCG 523
            :  || |:.|:.....|   |.|:      .||:     |.|.|.|||..:..|.  .:|..|
plant   415 I--INTGEKSIGFWKEGNGLVKKLDQQASSISALSTWKDHLKHIVWPGEADSVPKGWQIPTKG 475

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3216NP_726013.2 PBP1_NPR_GC-like 90..501 CDD:380575 85/465 (18%)
Protein Kinases, catalytic domain 616..885 CDD:473864
HNOBA <891..939 CDD:462234
CYCc 918..1109 CDD:214485
GLR2.3NP_001325281.1 PBP1_GABAb_receptor_plant 69..436 CDD:380645 88/501 (18%)
GluR_Plant 476..825 CDD:270404 110/583 (19%)
Lig_chan 604..865 CDD:459656
Blue background indicates that the domain is not in the aligned region.

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