DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9313 and dync2i2

DIOPT Version :9

Sequence 1:NP_001286657.1 Gene:CG9313 / 37374 FlyBaseID:FBgn0034566 Length:740 Species:Drosophila melanogaster
Sequence 2:NP_001099160.1 Gene:dync2i2 / 794361 ZFINID:ZDB-GENE-070928-9 Length:501 Species:Danio rerio


Alignment Length:438 Identity:118/438 - (26%)
Similarity:180/438 - (41%) Gaps:86/438 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   332 WEDPADEFREGEGNLLPLWKFQY--DKTKKMNVTDILFNPSYYDLFAVCFGSHDFMKQTNE-GYL 393
            ||       |...::..:::.|:  .:.|.:.||.:.:|.: ..:.|..||..|....:|| ..:
Zfish   104 WE-------EQNESVSCMYRLQHVDAQEKSLQVTSVSWNCT-GSVIACGFGRVDDGDWSNEKACV 160

  Fly   394 CLFTVK----NPSFPDYIIQTDCGVMCCDIHPTYPFLAVIGLYDGNVAVYNLREDCKEPLYVSRG 454
            |.:.|.    ||..||.||.....|||...||..|.:...|||.|.|.|::.... ::.:....|
Zfish   161 CTWNVDRQNLNPKRPDVIIDVATPVMCLCFHPVRPSVVAGGLYSGEVVVWDTSRS-QDLILAQTG 224

  Fly   455 VNC-KHGECVWQIKWGLDMADGEVNFFSVSSDGRVFNWIL--MQNKLWVTTIITLYRENGLVDG- 515
            ::. .|.|.|:||.|......||.:..|..|.|||..|.:  .:.||.:::...|.|:.....| 
Zfish   225 MSADTHREPVYQINWVPGARRGEFSVLSAGSGGRVLLWTIDGSEAKLLLSSGYALVRQQMPQSGA 289

  Fly   516 PDGTKVTLKSGGSCMVFHPVDNKIFLVGTECGYIYKCSTAFSSKYLMTYYAHNMSV--------- 571
            ...|:.:|..|.:.:...|.|...||||:|.|.:.|||  |||:......:...||         
Zfish   290 ASKTRGSLTIGVTAVALSPWDLDTFLVGSEGGLVLKCS--FSSETAAAVPSDGESVILRAPMQFS 352

  Fly   572 --------YRIDFNRFNSNIFVSCGADWMVKVWEDMRPDPLFIFDLGAAVGD-----VKWAPYSS 623
                    :.:.|:.|:.|:|||.|.|.:..:...::|.||    |...|.|     |:|:|...
Zfish   353 FSPRGGPIHSVHFSPFHRNLFVSVGTDGLAHLHSVLQPCPL----LALRVSDSYVFGVRWSPTRP 413

  Fly   624 TVFAAVTTEGKVHVFDL-------------NVNKYKAICIQAVVPKRKNKLTRLSFNEKLAFIVV 675
            .||||||.:|.|.:|||             |.....|.|:: ..||..|            .:.|
Zfish   414 LVFAAVTGQGLVQMFDLGRRSLRPVATIDQNAGGQPAYCLE-FNPKHTN------------LLAV 465

  Fly   676 GDEKGVTTSLKLSPNLRMMVKPPKKQLYLDQNTLQIGKLEKLLSLVRE 723
            |:..|.....:||..|            .:|...:...||:|.:.|.:
Zfish   466 GNADGSVNIWQLSAEL------------TEQGAKETAMLEQLANEVAD 501

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9313NP_001286657.1 WD40 <353..706 CDD:225201 110/398 (28%)
WD40 repeat 362..412 CDD:293791 17/54 (31%)
WD40 413..640 CDD:295369 77/252 (31%)
WD40 repeat 415..454 CDD:293791 11/38 (29%)
WD40 repeat 463..505 CDD:293791 14/43 (33%)
WD40 repeat 513..557 CDD:293791 15/44 (34%)
WD40 repeat 571..608 CDD:293791 12/53 (23%)
WD40 repeat 613..654 CDD:293791 19/58 (33%)
dync2i2NP_001099160.1 WD40 66..481 CDD:225201 112/404 (28%)
WD40 repeat 130..180 CDD:293791 15/50 (30%)
WD40 repeat 187..229 CDD:293791 11/42 (26%)
WD40 repeat 235..296 CDD:293791 17/60 (28%)
WD40 repeat 301..338 CDD:293791 14/38 (37%)
WD40 repeat 361..399 CDD:293791 12/41 (29%)
WD40 repeat 403..442 CDD:293791 14/38 (37%)
WD40 repeat 450..477 CDD:293791 8/39 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1587
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R6637
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.840

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