DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9313 and dync1i1

DIOPT Version :9

Sequence 1:NP_001286657.1 Gene:CG9313 / 37374 FlyBaseID:FBgn0034566 Length:740 Species:Drosophila melanogaster
Sequence 2:XP_009290517.1 Gene:dync1i1 / 561525 ZFINID:ZDB-GENE-061215-62 Length:647 Species:Danio rerio


Alignment Length:697 Identity:142/697 - (20%)
Similarity:251/697 - (36%) Gaps:189/697 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 KSRQLLKP-----DDQLDLTEAELGEEITKVLTPTNTNIVRNLVVYSFKEGEF---VPAPL---- 94
            :|..|.:|     |..||....|....:..:.......:|:.|.:.::....|   ||.|:    
Zfish    36 ESEMLQRPENVTEDSDLDRKRRETEALLQSIGISPEPPLVQPLQLLTWDTCYFHYLVPTPMSPSS 100

  Fly    95 -----PGNTVTLIAFAG------NSLHVDSDEGRRQIEESDEIGYPLP------------MPNYT 136
                 |..|.:..:..|      .:|..|:|....|:......|..:.            ||...
Zfish   101 QSVSPPSETGSQESIDGGTVERYRTLQWDTDPSALQLLADSVHGCRMQRLGASKIVQIDFMPKEL 165

  Fly   137 VVEQRETDNVDGEEGEGEEDDDGATAKDAAVEDEDVEEEDDEEAKGTEGDEGEGEGEGEGAAARQ 201
            |...:||                    ...|.....|||||||....:.:....:.|.|    :.
Zfish   166 VTYSKET--------------------QTPVASNQPEEEDDEELSVPKSEPASQQLEEE----KT 206

  Fly   202 EDDEPAHQAAAVSSKKRKLINQFNYCERGALTYTNPKRNVDTQTIPPPRSQFGANVLQWVIYDSY 266
            ::.|..|.....:.:|.:::                                            :
Zfish   207 QEVEEVHPRELTNEEKEQIV--------------------------------------------H 227

  Fly   267 MENFAESQKDGTKKEERKRGKREKKFRDKSAIAEQLNKKYLKCWQILERMINQNIYDDIAHDY-- 329
            .|:|.                   .|.|:|.             :::||::.::  .||..||  
Zfish   228 SEDFL-------------------FFFDRSI-------------RVVERVLAED--KDIFFDYSG 258

  Fly   330 RYWEDPADEFREGE---GNLLPLWKFQYDK--TKKMNVTDILFNPSYYDLFAVCFGSHDFMKQTN 389
            |..||     :||:   |:.|...:..||:  :|...||.:.::|.|.:|....:.:::......
Zfish   259 RDMED-----KEGDLQAGSNLSFNRHFYDEHWSKHRVVTSLDWSPQYPELLVASYNTNEDAPHEP 318

  Fly   390 EGYLCLFTVK-NPSFPDYIIQTDCGVMCCDIHPTYPFLAVIGLYDGNVAVYNLREDCKEPLY--- 450
            :|.:.::.:| ..:.|:||......||.......:|.|.:.|.|.|.:|:::.|...:.|:.   
Zfish   319 DGVVLVWNMKFKKATPEYIFHCQSSVMSVGFAQFHPNLVIGGTYSGQIAMWDNRSHRRTPVQRTP 383

  Fly   451 VSRGVNCKHGECVWQIKWGLDMADGEVNFFSVSSDGRVFNWILMQNKLWVTTIITLYRENGLVDG 515
            :|...:.....||..:  |...|:   |..:||:||::.:|.|........::..:|.::..|  
Zfish   384 LSATAHTHPVYCVNVV--GTQNAN---NLITVSTDGKMCSWSLDMLSQPQESMELIYNKSKPV-- 441

  Fly   516 PDGTKVTLKSGGSCMVFHPVDNKIFLVGTECGYIYKCSTAFSSKYLMTYY-----------AHNM 569
                .||      ||.|...|...::||:|.|.:|..|...|...:...:           .|| 
Zfish   442 ----AVT------CMAFPASDVNNYVVGSEEGTVYTASRHGSKAGIGEIFDGHQGPVTGISCHN- 495

  Fly   570 SVYRIDFNRFNSNIFVSCGADWMVKVWEDMRPDPLFIFDLGA-AVGDVKWAPYSSTVFAAVTTEG 633
            :|..:||    |::|.:...||.||:|......||:.|:..| .|.||.|:|....:||.|...|
Zfish   496 AVGPVDF----SHLFTTSSFDWTVKLWSTKHNKPLYSFEDNADYVYDVMWSPVHPALFATVDGNG 556

  Fly   634 KVHVFDLNVNKYKAICIQAVVPKRKNKLTRLSFNEKLAFIVVGDEKG 680
            ::.::  |:|.|..:...:|..:....|.|:.:......:.|||.:|
Zfish   557 RLDLW--NLNNYTEVPSASVSVEGGCALNRVRWASGGREVAVGDSEG 601

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9313NP_001286657.1 WD40 <353..706 CDD:225201 85/346 (25%)
WD40 repeat 362..412 CDD:293791 10/50 (20%)
WD40 413..640 CDD:295369 62/241 (26%)
WD40 repeat 415..454 CDD:293791 10/41 (24%)
WD40 repeat 463..505 CDD:293791 10/41 (24%)
WD40 repeat 513..557 CDD:293791 13/43 (30%)
WD40 repeat 571..608 CDD:293791 12/36 (33%)
WD40 repeat 613..654 CDD:293791 12/40 (30%)
dync1i1XP_009290517.1 Dynein_IC2 147..175 CDD:288403 5/47 (11%)
WD40 215..608 CDD:225201 104/494 (21%)
WD40 284..607 CDD:295369 83/342 (24%)
WD40 repeat 292..337 CDD:293791 7/44 (16%)
WD40 repeat 347..388 CDD:293791 9/40 (23%)
WD40 repeat 394..437 CDD:293791 12/47 (26%)
WD40 repeat 443..490 CDD:293791 13/52 (25%)
WD40 repeat 498..530 CDD:293791 11/35 (31%)
WD40 repeat 536..574 CDD:293791 12/39 (31%)
WD40 repeat 582..608 CDD:293791 6/20 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1587
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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