DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9313 and dnai4

DIOPT Version :10

Sequence 1:NP_001286657.1 Gene:CG9313 / 37374 FlyBaseID:FBgn0034566 Length:740 Species:Drosophila melanogaster
Sequence 2:NP_001018595.1 Gene:dnai4 / 553797 ZFINID:ZDB-GENE-050522-322 Length:778 Species:Danio rerio


Alignment Length:602 Identity:161/602 - (26%)
Similarity:256/602 - (42%) Gaps:131/602 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   162 AKDAAVEDEDVEEEDDEEAKGTEGDEGEGEGEGEGAAARQEDDEPAHQAAAVSSKKRKLINQFNY 226
            |...::|.||.|...:.....||..:.           ||.:|:                    |
Zfish   206 AVSVSLESEDAEAVKERNNAYTELCKN-----------RQGNDK--------------------Y 239

  Fly   227 CERGALTYTNPKRNVDTQTIPPPRSQFGANVLQWVIYDSYMENFAESQKDGTKKEER-------- 283
            .||...|:::..:..:.|...............|.:|||: .|.::...:.....||        
Zfish   240 VERSMQTFSDAPKTKEVQCDSITMVDKAVMCTVWDMYDSF-NNISDVSANTVVSSERHEATIPES 303

  Fly   284 ---------KRGKR-------------EKKFRDKSAIAEQLNK-----------KYLKCWQILER 315
                     ||..:             .....:|.|....|::           |..:...::||
Zfish   304 SPEGHLVHPKRSNQSLSVVSTVSTVSGSSTHIEKMACVLPLDEEPDLQLILQSDKLKQDLALMER 368

  Fly   316 MINQNIYDDIAHDYRYW---EDP--------ADEFREGEGN-----LLPLWKFQYDKTKKMNVTD 364
            ::..|::......||..   |||        .:.:.|...|     |..||.|..:.|...|||.
Zfish   369 VVLANVFQPKLAAYRQLPIIEDPDCVQMVMEEESWTEQSKNSHCPFLERLWDFSCELTMGRNVTC 433

  Fly   365 ILFNPSYYDLFAVCFGSHDFMKQTNEGYLCLFTVKNPSFPDYIIQTDCGVMCCDIHPTYPFLAVI 429
            :::|....||.||.:|..:| |..|.|.:|.:::|||::||.:...:.||...|...:......:
Zfish   434 MVWNKKNPDLLAVGYGQVEF-KNPNSGLVCCWSLKNPTWPDRVFYCESGVTALDFSASNANQLAV 497

  Fly   430 GLYDGNVAVYNLREDCKEPLYVSRGVNCKHGECVWQIKW-----GLDMADGEVNFFSVSSDGRVF 489
            |:|||.:|:||::...:.|:..|......|...|||:.|     ||....||: ..|||||||:.
Zfish   498 GMYDGTIAIYNVQTSEQTPITDSSDCANLHTSPVWQLTWIDHEDGLAADKGEI-LVSVSSDGRIS 561

  Fly   490 NWI---------LMQNKL----WVTTIITLYRENGLVDGPDGTKVTLKSGGSCMVFHPVDNKIFL 541
            .||         ||:.|:    |...|.:|                  :.|.|..|||.|:||:|
Zfish   562 KWIHYKSMECVDLMKLKIHDLQWKQHISSL------------------TPGMCFDFHPNDSKIYL 608

  Fly   542 VGTECGYIYKCSTAFSSKYLMTYYAHNMSVYRIDFNRFNSNIFVSCGADWMVKVWEDMRPDPLFI 606
            ||||.|:|:|||::::.:||.:|.||...||::.::.|.|::|:||.:||.:::|......|:..
Zfish   609 VGTEEGHIHKCSSSYNEQYLDSYKAHKRPVYKVTWSPFCSDVFLSCSSDWTIQLWRQDLQIPVMG 673

  Fly   607 FDLG-AAVGDVKWAPYSSTVFAAVTTEGKVHVFDLNVNKYKAICIQAVVPKRKNKLTRLSFNEKL 670
            |..| ..|.|:.|:|:.:|||.|| :||||.::||.|:......:....|....  |.|.|:.:.
Zfish   674 FTSGQRVVFDIMWSPHCATVFGAV-SEGKVEIWDLRVSSLDPTLVNWTSPGVNP--TALLFSPET 735

  Fly   671 AFIVVGDEKGVTTSLKL 687
            ..::|||.:|..|..||
Zfish   736 DCVLVGDSEGQVTVYKL 752

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9313NP_001286657.1 WD40 repeat 362..412 CDD:293791 18/49 (37%)
WD40 413..640 CDD:475233 85/245 (35%)
WD40 repeat 415..454 CDD:293791 10/38 (26%)
WD40 repeat 463..505 CDD:293791 22/59 (37%)
WD40 repeat 513..557 CDD:293791 18/43 (42%)
WD40 repeat 571..608 CDD:293791 11/36 (31%)
WD40 repeat 613..654 CDD:293791 16/40 (40%)
dnai4NP_001018595.1 WD40 repeat 431..473 CDD:293791 16/42 (38%)
WD 1. /evidence=ECO:0000255 477..517 10/39 (26%)
WD40 479..751 CDD:475233 97/293 (33%)
WD40 repeat 483..526 CDD:293791 10/42 (24%)
WD 2. /evidence=ECO:0000255 526..573 18/47 (38%)
WD40 repeat 531..576 CDD:293791 18/45 (40%)
WD 3. /evidence=ECO:0000255 586..629 21/60 (35%)
WD40 repeat 589..624 CDD:293791 19/52 (37%)
WD 4. /evidence=ECO:0000255 633..673 13/39 (33%)
WD40 repeat 638..675 CDD:293791 11/36 (31%)
WD 5. /evidence=ECO:0000255 676..715 17/39 (44%)
WD40 repeat 681..707 CDD:293791 13/26 (50%)
WD 6. /evidence=ECO:0000255 721..760 11/34 (32%)

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