DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9313 and dync2i2

DIOPT Version :9

Sequence 1:NP_001286657.1 Gene:CG9313 / 37374 FlyBaseID:FBgn0034566 Length:740 Species:Drosophila melanogaster
Sequence 2:XP_012823678.1 Gene:dync2i2 / 448417 XenbaseID:XB-GENE-953027 Length:503 Species:Xenopus tropicalis


Alignment Length:457 Identity:114/457 - (24%)
Similarity:195/457 - (42%) Gaps:87/457 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   312 ILERMINQNIYDDIAHDYRY-WEDPADEFREGEGNLLPLWKFQYDKT--KKMNVTDILFNPSYYD 373
            |:.:.:|:|........|.. ||:..::       :..|...||...  :::.||.:.:|.:  .
 Frog    85 IMIKELNKNWKSHAFDGYEVNWEEQHEQ-------VTCLHSLQYPDALEQQLQVTSVSWNST--G 140

  Fly   374 LFAVC----FGSHDFMKQTNEGYLCLFTVKNPSF----PDYIIQTDCGVMCCDIHPTYPFLAVIG 430
            ....|    ||..|:  .|.:.|:|.:.:....|    ||.::.....|||...||:.|.|...|
 Frog   141 SIIACSYGRFGDGDW--STEKSYVCTWNLDRRGFNANNPDTVLDVPSSVMCLAWHPSQPSLIAGG 203

  Fly   431 LYDGNVAVYNL-REDCKEPLYVSRG-VNCKHGECVWQIKWGLDMADGEVN-FFSVSSDGRVFNWI 492
            |::|:|.|::. |.|  :||....| |...|.:.|:|:.|..:.:.|..: .|||||||::..| 
 Frog   204 LFNGDVLVWDTSRTD--DPLIGRTGHVGDTHTDAVYQVGWMQEKSQGHRHQVFSVSSDGKILVW- 265

  Fly   493 LMQNKLWVTTIITLYRENGLV--DG--------PDGTKVTLKSGG------SCMVFHPVDNKIFL 541
                        .:.:|..||  ||        |..||:.....|      :|:.:...|..:|:
 Frog   266 ------------QMEKEGHLVLLDGFALVAQQIPSNTKIHKPGRGDTAVGVTCLSYSHFDPSLFI 318

  Fly   542 VGTECGYIYKCSTAF---------SSKYL-----MTYYAHNMSVYRIDFNRFNSNIFVSCGADWM 592
            ||.|.||:.|||::.         ||..|     .|:..|...||.:..:.|:.|:|:|.|.|..
 Frog   319 VGVEGGYLLKCSSSVQTLAPINMGSSVPLRAPAQFTFSPHGGPVYSVTCSPFHRNLFLSAGTDGH 383

  Fly   593 VKVWEDMRPDPLFIFDLGAA-VGDVKWAPYSSTVFAAVTTEGKVHVFDLNVNKYK-AICIQAVVP 655
            ..::..::..||....|... :..::|:|....||||.:.:|:|.:.|...:..| ::||:....
 Frog   384 AHLYSMLQAKPLVSLQLSQKYLFSIRWSPVRPLVFAAASGDGEVVLVDFAKSFQKPSLCIKQTAS 448

  Fly   656 KRKNKLTRLSFNE-KLAFIVVGDEKGVTTSLKLSPNLRMMVKPPKKQLYLDQNTLQIGKLEKLLS 719
            .|  .:..|.||. :...:..||..|.....:||.:            :::|...:...|:::.|
 Frog   449 GR--PVYCLEFNHAQSQLLAAGDGTGTVKIWQLSSD------------FIEQRARETALLDEIAS 499

  Fly   720 LV 721
            .|
 Frog   500 EV 501

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9313NP_001286657.1 WD40 <353..706 CDD:225201 103/398 (26%)
WD40 repeat 362..412 CDD:293791 13/57 (23%)
WD40 413..640 CDD:295369 75/260 (29%)
WD40 repeat 415..454 CDD:293791 15/39 (38%)
WD40 repeat 463..505 CDD:293791 12/42 (29%)
WD40 repeat 513..557 CDD:293791 18/68 (26%)
WD40 repeat 571..608 CDD:293791 10/36 (28%)
WD40 repeat 613..654 CDD:293791 12/41 (29%)
dync2i2XP_012823678.1 WD40 repeat 131..182 CDD:293791 13/54 (24%)
WD40 184..481 CDD:392136 87/313 (28%)
WD40 repeat 188..227 CDD:293791 15/40 (38%)
WD40 repeat 236..297 CDD:293791 20/73 (27%)
WD40 repeat 305..355 CDD:293791 14/49 (29%)
WD40 repeat 362..399 CDD:293791 10/36 (28%)
WD40 repeat 405..446 CDD:293791 12/40 (30%)
WD40 repeat 452..477 CDD:293791 6/24 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R6637
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.940

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