DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9313 and Dnai2

DIOPT Version :10

Sequence 1:NP_001286657.1 Gene:CG9313 / 37374 FlyBaseID:FBgn0034566 Length:740 Species:Drosophila melanogaster
Sequence 2:NP_001261723.1 Gene:Dnai2 / 39318 FlyBaseID:FBgn0036195 Length:585 Species:Drosophila melanogaster


Alignment Length:466 Identity:107/466 - (22%)
Similarity:183/466 - (39%) Gaps:103/466 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   281 EERKRGKREKKFRDKSAIAEQLNKKYLKCWQILERMINQ----NIYDDIAHDYRYWE--DPA--- 336
            |:..|.|| |..:|::.|.:.:|     ..:.:|..|:|    |||::      |:|  |||   
  Fly    88 EQTVRYKR-KIEKDENYITQVMN-----LTKPMEHYIHQNNAVNIYEN------YFENLDPAPLP 140

  Fly   337 --------DEFREGEGNLLPL----W---------------KFQYDKT-KKMNVTDILFNPSYYD 373
                    :.:|:.....:|:    |               :||.||: :|.|        ||  
  Fly   141 EPCKSRTVNVYRDPNPIKVPVKHLSWSPDGGIKMAVSHCDMRFQGDKSNQKCN--------SY-- 195

  Fly   374 LFAVCFGSHDFMKQTNEGYLCLFTVKNPSFPDYIIQTDCGVMCCDIHPTYPFLAVIGLYDGNVAV 438
                                 ::.|:||:.|...::.....:|.:.:...|...|.|:|:|.||.
  Fly   196 ---------------------IWEVENPNEPFLTLEPKVPCVCLEYNQKDPTSLVSGMYNGQVAA 239

  Fly   439 YNLREDCKEPLYVSRGVNCKHGECVWQIKWGLDMADGEVNFFSVSSDGRVFNWILMQNKLWVTTI 503
            ::.|.. |.|:.:|....| |.:.|..:.|....:..|  |||..|||:|. |       |.|..
  Fly   240 WDTRHG-KLPVMISEREVC-HRDPVNSVLWNNSKSGTE--FFSGGSDGQVL-W-------WDTRK 292

  Fly   504 ITLYRENGLVD--GPDGTKVTLKSGGSCMVFHPVDNKIFLVGTECGYIYKCS---TAFSSKYLMT 563
            :|...:..|:|  ..|...::...|.|.:.:.......|:.|||.|.::.|:   ...:.|..:.
  Fly   293 LTEPLDRLLMDPVKSDDQDLSRSYGISVLEYETTIPTRFMAGTEMGMLFSCNRKGKTPTEKIQIR 357

  Fly   564 YYAHNMSVYRIDFNRFNSNIFVSCGADWMVKVW-EDMRPDP-LFIFDLGAAVGDVKWAPYSSTVF 626
            ...|...||.|..|......|::.| ||..::| ||.|... ::.....:.:.|..|:....:.|
  Fly   358 MMCHLGPVYAITRNPAFVKNFLTVG-DWCARIWSEDCRESSIIWTKSSSSMLTDGAWSYTKVSQF 421

  Fly   627 AAVTTEGKVHVFDLNVNKYKAICIQAVVPKRKNKLTRLSFNEKLAFIVVGDEKGVTTSLKLSPNL 691
            .....:|.:..:||...:.:.:....|..:   .|..:..||...|:..|.:.|.|..:::|.|:
  Fly   422 FITRMDGVLDTWDLLQQQNEPVLTVKVCDE---PLYCVRTNENGKFVSCGSQLGATFLVEVSDNM 483

  Fly   692 RMMVKPPKKQL 702
            .|..|..|..|
  Fly   484 VMSAKNDKPLL 494

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9313NP_001286657.1 WD40 repeat 362..412 CDD:293791 6/49 (12%)
WD40 413..640 CDD:475233 57/233 (24%)
WD40 repeat 415..454 CDD:293791 12/38 (32%)
WD40 repeat 463..505 CDD:293791 13/41 (32%)
WD40 repeat 513..557 CDD:293791 10/48 (21%)
WD40 repeat 571..608 CDD:293791 12/38 (32%)
WD40 repeat 613..654 CDD:293791 6/40 (15%)
Dnai2NP_001261723.1 WD40 212..469 CDD:475233 64/272 (24%)
WD40 repeat 215..254 CDD:293791 12/39 (31%)
WD40 repeat 262..304 CDD:293791 15/51 (29%)
WD40 repeat 318..355 CDD:293791 8/36 (22%)
WD40 repeat 365..401 CDD:293791 12/36 (33%)
WD40 repeat 408..433 CDD:293791 4/24 (17%)
WD40 repeat 162..208 CDD:293791 13/76 (17%)

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