DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9313 and CG13930

DIOPT Version :9

Sequence 1:NP_001286657.1 Gene:CG9313 / 37374 FlyBaseID:FBgn0034566 Length:740 Species:Drosophila melanogaster
Sequence 2:NP_647645.1 Gene:CG13930 / 38210 FlyBaseID:FBgn0035256 Length:685 Species:Drosophila melanogaster


Alignment Length:561 Identity:124/561 - (22%)
Similarity:228/561 - (40%) Gaps:93/561 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   202 EDDEPAHQAAAVSSKKRKLINQFNYCERGALTYTNPKRNVDTQTIPPPRSQFGANVLQWVIYDSY 266
            ||:....:..:.:.|.|:.::    .:...:|.....|.|:|:.:  ..:|.|:.|..:.:||:|
  Fly   136 EDNRKYDELLSGTDKTRRTVD----ADTQTMTALMKSRLVNTERL--TTAQMGSYVSNFEMYDTY 194

  Fly   267 MENFAESQKDGTKKEERKRGKREKKFRDKSAIAEQLNKKYLKCWQ----ILERMINQNIYDDIAH 327
                .:.:|..|..:.:...|.|........:.:.:....|..::    :..|::..|:::....
  Fly   195 ----TDLEKSTTSVQVQGAKKMEITTYHVGGVDQFVGINCLPGFRLALMLTMRILASNVFEPQQR 255

  Fly   328 DYRYW--EDPADEFREGEGNLLPLWKF---QYDKTKKMNVTDILFNPSYYDLFAVCFG--SH-DF 384
            .||..  .||..|..:.:..|..||:.   ..|......|:|:.|.||..|:.||.:|  || ..
  Fly   256 RYRNMAPPDPLAEDVKFKYRLGLLWRLSPPSSDPKVHQAVSDMSFCPSNGDIMAVAYGVYSHGKV 320

  Fly   385 MKQTNEGYLCLFTVKNPSFPDYIIQTDCGVMCCDIHPTYPFLAVIGLYDGNVAVYNLREDCKEPL 449
            .|....|::.::.:|||..|:........|:..:..||.|.|..|||::|.|.|.::......||
  Fly   321 SKLPRSGWVYVWNIKNPVNPERRYHYQVPVVTVEFSPTQPQLLAIGLHNGGVEVRDISGQDLPPL 385

  Fly   450 YVSRGVNCKHGECVWQIKWGLDMADGEVN--------FFSVSSDGRVFNWILMQ--NKLWVTTII 504
            .||:.::..:.|.|..|||  ...:|:|.        |.:.|..|.|..:.|:.  |.|.:.. .
  Fly   386 AVSQRLSSPYFEPVTAIKW--IYFEGDVGCRNPHITPFLATSQAGAVTKYRLINSPNMLGLEQ-Q 447

  Fly   505 TLYRENGLVDG------PDGTKVTLKSGGSCM--VFHPVDNKIFLVGTECGYIYKCSTAFSSKYL 561
            .|.|..|.::|      |....:.......|:  |..||.:.|:.|.|:.|.:|||||.:..::|
  Fly   448 RLQRAEGELEGIPIERQPPAASLLANRHPQCLEIVLDPVQSDIYYVLTDEGTLYKCSTNYPLQHL 512

  Fly   562 MTYYAHNMSVYRIDFNRFNSNIFVSCGADWMVKVW------------EDMRPDPLFIFDLGAAVG 614
            .....|:.....::|:.::..::::||:||.:::|            ..:.|           |.
  Fly   513 ELRQVHDGPAACMEFSPWSPRMYLTCGSDWCIRIWLAGILLPIVTLQHHLSP-----------VH 566

  Fly   615 DVKWAPYSSTVFAAVTTEGKVHVFDLNVNKYKAICIQAVVPKRKNKLTRLSFNEKLAFIVVGDEK 679
            ..:|:...||:..:: :...|.::||..:..|.  :.:.|.......|...|......:.||:|.
  Fly   567 CARWSRTHSTILVSL-SRSTVDIWDLRNSTMKP--VSSTVIDADIFYTTFKFTHCGRSLAVGNEA 628

  Fly   680 G------------------------VTTSLKLSPNLRMMVK 696
            |                        :..:|.:.|:||..||
  Fly   629 GNLLMLSFEDMPFPPHFQYKQLKRAIFKALSMQPDLRKQVK 669

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9313NP_001286657.1 WD40 <353..706 CDD:225201 95/401 (24%)
WD40 repeat 362..412 CDD:293791 17/52 (33%)
WD40 413..640 CDD:295369 61/256 (24%)
WD40 repeat 415..454 CDD:293791 14/38 (37%)
WD40 repeat 463..505 CDD:293791 13/51 (25%)
WD40 repeat 513..557 CDD:293791 15/51 (29%)
WD40 repeat 571..608 CDD:293791 7/48 (15%)
WD40 repeat 613..654 CDD:293791 8/40 (20%)
CG13930NP_647645.1 WD40 <279..648 CDD:225201 91/385 (24%)
WD40 repeat 295..344 CDD:293791 17/48 (35%)
WD40 repeat 350..397 CDD:293791 15/46 (33%)
WD40 repeat 400..473 CDD:293791 17/75 (23%)
WD40 repeat 478..513 CDD:293791 13/34 (38%)
WD40 <518..>593 CDD:295369 15/86 (17%)
WD40 repeat 524..560 CDD:293791 6/35 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45435248
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1587
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D29742at33392
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm42488
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR12442
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
65.850

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